Vibrio sp. STUT-A16: VspSTUT16_38730
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Entry
VspSTUT16_38730 CDS
T10420
Name
(GenBank) ligand-gated channel
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vis Vibrio sp. STUT-A16
Brite
KEGG Orthology (KO) [BR:
vis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vis02000
]
VspSTUT16_38730
Transporters [BR:
vis02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT16_38730
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BDR20527
LinkDB
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Position
2:complement(856748..858886)
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AA seq
712 aa
AA seq
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MFYQNLDGKVRVRAGLSTTYSVLAIAIASATSMSAVAAPAAKNETTVMETVVVTGSVIGN
SDIEDVKEYPGARTVITRDQIEKTAAGSIDNALQRVPGIKVQDESGTGVLPNISVRGLKA
SRSGHAQFLMDGVPLTLAPYGHTGQSIFPATLSMLDRIDIVRGGAAVQYGPNNVGGVINL
VTKPIPHTWQTEISNRLTVFDGGDAPLNDFYLRTGGWLSDTFALQLEGNFLKGESFREHS
DTDVKNFQAKAQWLLSDTQEIQAFLQRYDAETQMPGALSPQDYEQDRHQSKRPYDDYEGK
STRWSVKYIHDLPFADSAELEVLTFGHKSERLFKWGFNSAGGHWADPALPATDVRTSPRE
FTVYGIEPKMAMYFGEGKSVTQNWIVGTRYVNEDIDYKLTQTPIAGGATSVPRDWHLDTD
AFAGYVSNEIGLFNDTLKVTPGLRVESVRMTFTDRGKKQTADNTVTEWLPGLTVAYNLTE
QWVTYANAQKSLRAPQIAYIRGLGEEGSELAWNYEVGARYTQDATSFNAALYRIDFEDQL
QWQSSTQTFDNIGKTLHQGIELSARYVPEVLPALSLGASYNYLDATLEEEGANKGNQLPH
ASKHQLGWDATYAFYGMDTTLSGFYFSDSYTDNANTSAEDATGATGKVPSYMVWNFNLGT
DLYKDDKGKLRMNVAVNNLFDEEYYFRGIDTSPVGRYPAPGRSYTLDLNYQF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttttaccagaatttggatggtaaagtgcgtgtacgtgctggtttgtctaccacttac
agtgtgctcgcgattgctatcgcttctgccacctccatgagcgcagttgccgctcctgcc
gcaaaaaacgaaaccaccgtgatggaaacggttgttgtcactggcagcgtgattggcaac
tctgacattgaagacgtcaaagagtaccctggtgctcgtaccgtcattacccgtgatcaa
attgagaaaaccgcagcgggttcgatcgataatgcgctacagcgtgttccgggtattaaa
gttcaggatgaaagcggaacgggcgtattgcctaacatttccgtacgtggtttgaaagca
agccgcagtggtcatgcgcagttcttgatggatggcgtgccgctaacgctcgcgccatac
ggccatactggtcagtctatcttcccagcaacgctgtcgatgcttgatcgtattgacatt
gtacgcggcggtgccgcagtgcagtacggtccaaacaacgtcggtggtgtgatcaaccta
gtgaccaaaccgattccacacacttggcaaactgaaatcagtaaccgccttaccgtgttt
gatggcggtgatgcgccgctgaatgatttttacctacgcacgggcggttggttaagcgac
acattcgcgctacagttggaaggtaactttctaaaaggcgaaagcttccgtgaacattcc
gatacggacgtgaagaactttcaagctaaagcacaatggctactgagtgatactcaagag
attcaagcattcctgcaacgttacgatgctgaaacgcaaatgccgggcgcactttcgcca
caagattacgagcaagatcgtcatcaatcgaaacgcccgtacgatgattatgaaggtaag
tcgacgcgctggagtgttaagtacatccacgatttgccatttgccgacagtgccgagcta
gaagtgctaacgtttggtcacaaatcagagcgtcttttcaagtggggctttaacagtgcg
ggtggccattgggcggatccggctctgccagcgacggacgttcgtacctctccacgtgaa
tttaccgtgtacggcatagagccgaaaatggcgatgtattttggtgaaggcaaatccgtt
acccaaaactggatcgtgggtactcgttatgttaacgaagacattgactacaaactcact
cagactccaatcgccggtggtgcaaccagcgttccgcgtgattggcatttagatacggac
gcgtttgctggatacgttagcaacgaaattggtttgttcaatgatacattgaaggtaacg
cctgggttgcgtgttgagtcggttcgaatgacgtttaccgatcgtggtaaaaaacaaacg
gcagacaacaccgtgacggaatggttgccaggtttgacggtggcatacaacttaactgaa
cagtgggtgacgtatgcgaacgcgcaaaaatcacttcgtgcgccacaaattgcctacatc
cgaggcttgggtgaagaagggagcgaactggcttggaactacgaagtcggcgcgcgttac
acccaagatgcgaccagttttaacgctgcactttatcgcatcgattttgaagaccaactg
caatggcaaagctcaacgcagaccttcgataacatcggaaaaacacttcaccaaggcata
gagctttctgctcgttacgtgcctgaagttctacctgcactgagtttaggcgcaagctac
aactatctagacgctacgcttgaagaagaaggcgcgaataaaggtaatcaactgcctcac
gcctctaagcatcagcttggttgggatgcaacctacgcattttacggcatggacaccacg
ctatcgggcttctacttcagtgattcgtataccgataacgccaacaccagtgccgaagac
gcaacaggtgcaacgggcaaagtgccgtcttacatggtgtggaacttcaacttaggtacg
gatttatacaaagacgacaaaggcaagttacgcatgaatgttgcggtgaacaacttgttt
gacgaggagtattacttccgcgggattgatacaagcccagttggtcggtacccagctcca
ggacgctcttacacgctggatctgaactatcagttttaa
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