Varroa jacobsoni: 111267839
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Entry
111267839 CDS
T07417
Name
(RefSeq) paraspeckle component 1-like
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vja01009
]
111267839
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111267839
03041 Spliceosome [BR:
vja03041
]
111267839
Protein phosphatases and associated proteins [BR:
vja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111267839
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111267839
Spliceosome [BR:
vja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111267839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_ACIN1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
111267839
NCBI-ProteinID:
XP_022702126
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MFRGGGGGRGRGGGSWRPGGVGGGGFRGGRGGQQNSSSNNNSRSQNSNQQQPQQQPQQQQ
QQQQPQQQQQQQQQQQQQQQQQQQQQNNQSKQGNQTSNNQPQQQPQQQQSNRGAGGSGNF
PNQQQQQNRTPQGTPQSKQSTPQTTPKQGTPQQAQKQTPQQQKQNPPQNQDQSNKAQTST
PLGGLPQRDNNKGKAPSITVPPPPPPQNGNQKPFTPQNKNGTPNTNQKTPQGQQQAQNRP
SQTSPNKTPTQNNQQGQQGQQTQQNQQEQSAGGSNNDDPNSDNTKLFIATVKQGITDKEF
RELFSKFGKLKDVYLNKNKWFGLVTFETHADANSARKHYINSNILKLKWAQSAPKETPLI
LNQNNQEQTPVKKESSSKCRLFIGNLSPEVTPDNIRKLFEPYGTIMELFVPPGKGFGFVR
YETRASAEAAKNALEGEPFANRQLQIRFASQGAVLKVRNLSPFVTNELLHQAFEPFGELE
RATVFVDERGKSLGEGILEFSRKPVAVAVMRKAQQECLLLTTSPLPVIIEPMEVRDDEDG
FSEKMINKQSTGYLKDRDKAPRFAEKGTFEYEFAMKWKELLALEKLKKEQVDRELQLEKN
RLMEEMDIMRYDYDLDTLRRRLKLLESRQEEFENRKLVAEKNNKAREEELKVMRKTIAKR
QAEILGYPYEDEDEKLQQQQQSQPMQQQTGPGNSNQQLLSGHPVADAVLGAALVVPPAEQ
QQPSAAAENFLKQWNSITKGVSSSQDQQAQQAQQAQQQQHQGNNKMAPGQSMPPQQTPPQ
GQRPPPPNSWQEVPLPPSQANKAQPNPNKPAYMSYLGQQPNGKRLSDPGPVPKRRRY
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtggtggtggaggtggacgaggccgcggtgggggcagttggcgtcccggtggc
gtaggaggaggtggcttccgaggcgggcgcggcggtcaacaaaatagtagcagtaataat
aattctcgctcgcaaaactcaaaccagcagcagccgcagcagcagccgcagcagcagcag
cagcagcagcagccacaacagcagcagcagcagcagcagcagcagcagcagcaacagcag
caacagcagcagcaacagaataatcagagtaagcaaggcaatcaaacctccaacaatcag
ccgcaacagcaacctcaacaacagcaaagtaatcgtggcgctggtggcagtggaaatttc
ccgaatcagcaacaacagcaaaatcgcaccccccaaggaaccccacagtcgaaacaatcc
acgccacaaacgactcccaagcaagggacaccacagcaagctcagaagcaaaccccccaa
cagcaaaaacaaaacccgccacaaaatcaggatcagtctaataaggctcaaacctccact
cctctcggagggcttccccaaagagacaataacaagggcaaagcccctagcatcacagtg
ccgcctcctccaccgcctcaaaacggcaatcagaaaccttttacaccccagaataagaat
ggtactccaaacactaatcagaagactcctcagggtcagcaacaagcccaaaatcgccct
agtcaaacgagtccaaacaaaacgccgacgcagaataatcaacaaggacaacaagggcag
cagacacaacagaaccaacaggaacaaagcgcgggcgggtcaaataatgatgatccgaac
tcggataacacgaagctctttatcgcaaccgtaaaacaaggtataaccgacaaggagttt
cgtgaactgttttctaaatttggaaagctgaaagacgtttaccttaataaaaataaatgg
ttcggtctagtgacatttgaaacgcatgctgacgcaaactcagcccggaagcattatata
aattcaaatatccttaaacttaagtgggcacagtcagcaccaaaggaaacgccactgatt
cttaatcaaaacaaccaagagcagacgccagttaaaaaggagtcgagttcaaagtgtcgc
ttgtttatcggcaatctttcaccagaggtcactccagataatattcgcaagctgtttgag
ccttatggaacaattatggaattatttgttcccccaggaaaaggttttggttttgttcgc
tatgaaacacgggccagtgctgaggcagccaaaaacgccctcgaaggagagccatttgct
aaccgacagctgcagattcgttttgcgtcacaaggcgctgtgctcaaggtgcgaaacctt
agcccctttgtgacaaacgaattgcttcaccaagcgtttgagccttttggcgagctcgaa
cgagccacagtattcgtagacgaacgaggtaagtcactcggtgaaggcattcttgagttt
tctcgcaaaccagtcgccgtagcagttatgcgcaaggcgcaacaggagtgcctcttgtta
acgacgtcgcctctgcctgtaatcatcgagccgatggaagtgcgtgacgatgaagacggc
ttctcggaaaagatgattaacaagcagagtaccggctacctaaaagatcgtgacaaagcg
ccccgttttgcagagaaagggacatttgaatacgaatttgctatgaaatggaaggaactg
cttgcgttggagaagttgaagaaagaacaggtagatcgagagttacaacttgaaaaaaat
cgtctcatggaagagatggatataatgcgatatgactatgatttagacacgctacggcga
cgattaaagttgcttgaatctcgacaagaggaatttgaaaatcgcaaattagttgcggaa
aagaataacaaagcacgtgaagaggagctcaaggttatgcgtaaaacaatagctaagcga
caagccgaaatccttggatatccatatgaagacgaggatgaaaagttgcagcagcagcaa
caatcacagccaatgcaacaacagacaggaccaggtaattctaaccaacagcttttaagt
gggcatcccgtagctgacgcggtgttaggagccgctcttgttgtgcccccggccgaacag
caacagccgtcggcagcagcggagaacttcttgaaacaatggaactcgatcacgaaaggc
gtctcttcatcacaggatcaacaagcacaacaagctcagcaagcacaacaacagcagcac
caaggcaataacaagatggcgcctggtcaatcaatgccgccgcagcaaacgccgccccaa
gggcagaggcctcctccacctaacagttggcaggaagttccactgccgccatcgcaagca
aacaaggctcaaccaaaccccaacaagccagcatatatgtcttatctagggcaacagccc
aacggtaagaggttaagtgatcctggaccagtaccgaaacgtagaagatattaa
DBGET
integrated database retrieval system
