Varroa jacobsoni: 111271765
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Entry
111271765 CDS
T07417
Name
(RefSeq) transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111271765
Ion channels [BR:
vja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111271765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
111271765
NCBI-ProteinID:
XP_022708485
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MLTHEEKRFLLAVERGDLATSRRILSLTPAGQLNINCTDPLGRSALLMAIDNENLEMIEL
LLHYKVDTKDALLHAISEEYVEAVEVLLEHEEAIKKAGEPHSWEAIERDTATFTPDITPL
ILAAHRDNYEILKILLDRGYTFPAPHRVRCGCADCVRSRYEDSLRHSRSRINSYRALSSP
SLVALSSKDPILTAFELSGELRRLSFLEHEFKAEYMELRRKCQDFATALLDHTRTSYELE
VMLNYDPSGPAFEHGDRMHLSRLKMAIKYKQKKFCAHPNVQQLLASIWYEGLPGFRRKNI
VLQMMEILRIGLLFPIYSVAYILAPRSELGRTLRKPFIKFICHSASYITFLFLLILASQR
IETVMIEWFGTEEMKKEMRDDITTKRGAPPSIVEWIILAWVSGLIWSEMKQLWDLGLMGY
VSDMWNIIDFITNSLYVATVALRLIAYLQVQKEIAQNTGTAYLPRENWDAWDPILIAEGL
FATANIFSSLRLVYIFSVNPHLGPLQISLGRMVIDIVKFFFVYTLVLFAFACGMNQLLWY
YADNERQLCQTLSAGNASQPVGGRSEYAVCFTWRRFSNLFESSQTLFWASFGLIDLNNFE
LVGIQSYTRFWGLLMFGCYCVINVVVLLNLLIAMMNHSYQMISEHADVEWKFARCKLWMS
YFEDGGTVPPPFNIIPTPKSIGYLCSWFWRKFCGHSRSAKKEHLKTIRRKARQASERDLK
YQSIMRNLVRRYVTSEQRRADNQGVTEDDVNEIKQEISSFRYELLEVLKTSGFNTSMASG
SVGGLGGGKKGRQRERRLMKGFNIGLIDSSVPSLPEINVEEMNVTSRKPPGSRLARLARL
ASKKSKLRRSRWGHLVEATRNARAAFSRSRSEDSVSSQNSYEPSRSHHRTHSHHQSQHHT
HSHEHHQHQRQPNEPHRLDNLSSGSSDNDLHHVSSSRSETALSMRNRFSKKLRNFSRSKL
KLAFSAEGHRKAIAEKKSASRTLSAPPTSLRQSQLSLAPSKRHGERGYNNTTNFNASTGG
AAGTSEGNRRGEAAEAIGAGQADGASDLMRTGENNCCKDNNNEQQQQRGGVAECVLQLQR
QDSVDMSAGHSHSHSCNALIIGLMASHNLPTPGLSPIPSCASSKVPSPRNSINDSTFEPD
DDRSISLQIDRMPEVVIVEASSDENQLPLQSQSQAPSPALTMSTAMTTPLPQATSRRQYL
ASSQTTGGSVASVAAIAAAAGAVAIRMSGSAGSSPYPTPGSPVASVSSAESLDSLRHHQR
SPTSPGATSDVCTSPRSSETGGNRVTPGSAGSGTPHQLAPPASPSGRSHDAGANGLPLLV
RMYGIEPANKPMNVEWI
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgctcactcatgaagaaaaacggttcctgttggccgtcgaaagaggtgatctcgccact
tctaggaggattctgtcgttgactcctgcgggccaattgaatatcaattgcacagacccg
ctgggccgctcagcattgctcatggccatcgacaatgagaacctcgagatgatcgagctg
ctgcttcactacaaggtggacaccaaggacgcgctgctgcacgccatctccgaagagtat
gtggaggctgttgaagtcctattagaacatgaagaagcgatcaagaaggctggcgagcct
cacagctgggaagccatcgagcgggacacagcgacctttacacccgacatcactccgtta
atactggccgcgcaccgagacaattacgagatcctaaaaatcctactggatcggggttac
acctttccagcgccgcacagagtacgctgcggatgcgcagactgcgtacgttccaggtat
gaagacagtttgcggcattcacgatctcggataaactcgtaccgggcattatcctccccc
agcctcgtagcgctctccagcaaagatcccatcctcaccgcgttcgagctcagcggcgag
ctgaggcgactcagtttcctcgaacatgaatttaaggcagagtatatggaactccgccgt
aaatgccaggacttcgcgacggccctattggaccacacgcgcacctcgtacgagctagag
gtgatgctgaattacgacccgtcggggccagcattcgagcacggagaccgtatgcatttg
tcccgactcaagatggccataaagtataagcagaaaaagttctgtgcccacccgaatgta
cagcagttgttagcttcgatctggtacgaggggcttccaggattccgaaggaaaaacata
gttctacaaatgatggaaattttacgaattggtcttttattcccgatttactccgtggcc
tatattcttgcgccacgttccgaattgggacgaacgctccggaaaccgtttatcaaattt
atctgccattctgcctcgtatatcacgttcctttttttgctgatccttgcatcacagcga
attgagacagtgatgatagaatggtttggcaccgaagaaatgaagaaggaaatgcgcgac
gatatcacaacaaaacggggcgctccgccctctatcgttgaatggattattcttgcctgg
gtgtcaggattaatatggagcgaaatgaagcaattatgggacctcggattgatggggtac
gtgagcgatatgtggaatatcatcgacttcatcaccaactcgctttacgtcgccactgta
gcactgcgtctcatcgcatatttacaggtgcaaaaggaaatcgcgcaaaacacgggaacg
gcgtacctgccgcgcgaaaactgggacgcctgggacccgatcctgatcgccgagggtttg
ttcgcgacagccaacatcttcagttctctacggctagtctatatcttctctgtgaaccct
catttggggcccttacaaatctctctcggtcgcatggtcattgacattgtaaaatttttc
ttcgtctacactctcgttctatttgccttcgcctgcgggatgaatcaacttctttggtac
tatgctgataacgaacgtcagctgtgccagaccctttcggctggtaacgcgagccaaccc
gtaggcgggaggagcgaatacgctgtgtgcttcacctggaggcgcttctccaaccttttc
gaatcatcccagacgctattctgggcaagctttggtctgatcgacctaaataatttcgaa
cttgtgggcatccagagttatacgcgcttttggggtctactaatgtttggttgctactgc
gttatcaacgtagttgtgctgctcaatctgcttatcgctatgatgaaccactcgtatcag
atgatttccgaacacgcggacgtcgagtggaaatttgcgcgttgcaagctgtggatgagc
tattttgaagatggcggtactgtgccgcccccattcaatatcataccgacgcctaaaagt
attggctatctgtgttcatggttctggcgaaaattctgtggccactcaaggagcgccaag
aaggagcaccttaagacgatacggcggaaggctcgccaggcgagcgagcgcgatctcaaa
tatcagagcatcatgaggaatctcgtaagacgatacgttacaagcgaacagcggcgtgcg
gacaaccaaggggtgaccgaagatgacgtaaacgaaatcaaacaagaaatttcctcgttt
agatatgagctccttgaagtgctcaagaccagcgggttcaatacttcgatggcgtcagga
tcagtaggcggtttaggaggcggtaagaaaggacgacaacgggaacgccgactgatgaag
ggattcaatatcggcctaatcgacagttctgttccaagtctcccagagatcaatgtcgaa
gagatgaacgtcacgtcacggaagccacctggctctcggttggcccgcctcgcgagactc
gcaagcaagaagagcaaactgcgccgtagtcgctgggggcatctggtggaggccactcgc
aatgcgcgggcggctttttcacggagccgctccgaggactcggttagcagccaaaacagc
tacgagccctcgcgttcccaccaccgtactcattcccaccaccagtctcagcaccatact
cattcgcatgaacatcatcagcatcaacggcagccgaacgaaccgcatcgactcgacaat
ctgtcatcgggatcgtccgacaatgacctacatcacgtaagttcgtcgcgctcggaaact
gcgctctcgatgaggaatcgcttttctaagaagctcaggaacttcagccggtcgaagctt
aagcttgccttttcggccgaaggtcaccgtaaggcgatcgccgagaagaagtccgcgtcg
aggacactgagcgcgccacccacgtctttgcgtcaatcgcagctctcgttagcgccttcg
aaacgtcatggcgagcgtggttacaacaacacgacgaacttcaatgcatcaacgggtgga
gcagcaggaacgagtgaaggcaatagaagaggggaagcagcagaagcaatcggtgctgga
caggcagacggagcctctgatttgatgcgcacaggtgagaataattgttgcaaagataac
aacaacgaacaacagcaacaacgtgggggtgttgctgagtgcgtactccagctgcagcgg
caggacagcgtcgacatgtcagccggccactcgcattcgcactcgtgtaatgccctcatt
atcgggctaatggcttcgcataacttgcctacgccgggcttgtcgccgatcccgagttgc
gccagttcgaaagtaccctcgccgaggaattctataaatgacagtactttcgagccggac
gatgacagatctatatcgttacaaatcgacagaatgccggaagtggttatcgtcgaggcg
tcttccgacgagaaccagcttccgctccagtcgcagtcacaagcaccatccccagcgttg
acaatgtcaacagcaatgacaacgccactgccgcaggccacttcaaggcggcagtatcta
gctagcagccagactaccggaggttcggtagcgtcggtagcagcgatagctgctgccgct
ggagcggtagcaatccgtatgtctggatcggcgggttcgagcccttatccaactccggga
tctcctgtagccagtgtatcttctgctgaatcattggactcacttcgtcaccatcagcgg
tcgcccacctcgcctggtgctacgtccgacgtttgcacgagtccccgctcgtctgaaaca
ggtggaaatcgagtaacgcccggatctgctgggtctggaacaccccaccaactagcgccg
ccagcatccccttccggccgctcacacgacgcaggtgctaatggactaccactattagtt
cgaatgtatggcatcgagcccgccaataaacccatgaatgttgaatggatctag
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