Varanus komodoensis (Komodo dragon): 123024343
Help
Entry
123024343 CDS
T07701
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04510
Focal adhesion
vko04512
ECM-receptor interaction
vko04518
Integrin signaling
vko04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123024343 (COL6A3)
04518 Integrin signaling
123024343 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123024343 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123024343 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vko04147
]
123024343 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
vko00536
]
123024343 (COL6A3)
Exosome [BR:
vko04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123024343 (COL6A3)
Glycosaminoglycan binding proteins [BR:
vko00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123024343 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
123024343 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
vWA_SIBA-E
VWA_4
Motif
Other DBs
NCBI-GeneID:
123024343
NCBI-ProteinID:
XP_044287887
LinkDB
All DBs
Position
Unknown
AA seq
2932 aa
AA seq
DB search
MRKHRYLPLAAIFCLLLSGYHMADAQQQGANVKIGAAADIIFLVDSSWSIGKEHFQLVRE
FLYDVVKQLDVGENDFRFGLVQFSGSPHTEFQLNTYHTMQEVLSHISHMPYMGGGTKTGQ
GLEFLIRNHLTKAAGSRVSDGTPQIIIVLTDGRSQDDVTLPSSVLKSADVNMFAIGVQEA
VEGELKEIASDPLDMHLFNLENFTALHGIVGDLVASIRSSVTPEMPGAKGEIKDITAQES
ADIIFLIDGSNNIGAVTFAAIRDFIANLIERLSVGAELIRIGVVMYSDRPRTVFFLNSYT
QKSDVLDAVKALSALGGEEANTGEALEYVVQSHFTRSAGSRIEEGVPQVLVLISGSESSD
DIREGVLAMKQASIFSFSIGVQSADNAELQQIATDGSFVFTALDTSNLAELQELLLPNIV
GVAQRLILLDAPTVLTEVVEVNKKDIVFLIDGSTALGNAPFNAIRDFIAKIINRLEIGPD
LIQVAVAQYAETMKPEFYFNTFQTKKEVLTNVRRIKPVGGAPLNTGSALRLVKNEFFTSG
AGCRIDEGVLPMLVLITGGKSRDDVAQPAQEVKRNGIVILAVGSRNADRAELEQIAYGPS
FVFTPSEFRTVTLQGILPDIVTPIRTLSGSSVQTTSEVLLSKRDIIFLLDGSVNVGNTNF
PFVRDFLVNLVNSLDVGIDEVRVGLVQFKSKIDILFLIDGSTNLAGQVAAVRDFLVRIIS
DLNVGPDAVRVAVAQFSDNVQLEFNFHDIPSKQEMLQKLKKMKIKSGKLLNIGAALDYAT
RSIFVSNAGSRIDEGVPQFLVLLAAGRSSDSVDDTADALKQAGVVTFVVKTRSADPSELE
KIVYDPQFIITAESLSRLGDIQPEIVSLLKTIQIKHPVDEAQKKDVVFLIDGSDGIRRSF
PELKSFILRMIDNLDIGPDKVRVALAQHSNTIKPEFLLNEYLDKADIIQAIQRVSAMGGS
PVNTGAAINYLISHVFTQQAGSRVSEGVPQFLILVTAEKSTDDIRRPAMDLKTKGAVPFG
IGIGNADITELRAISYVPEFALLVSGVSELNTVQELIADRVTRLTRAEIDALRPSSPDSG
DIKRDVVFLIDGSKSAAGEFNSIIEFIERLVNNLNVGSDNTRVAVIQFSEDPKVEFLLNA
HSTKDEVQAALRRLRPKGGNKVNAGSAIEYVSRNIFTRPSGSRLEEGAPQFLILFLSRDP
DDIVEDSAVEVKRVGVASLPIGKNVDREEMVKIALSPEYVFQVSAFRHLPNLEQKLITPI
TTLTAQQINTLIGDVSVIPDIDSEAKDIVFLIDSSANVVPNDLPHIRDFIIRIVQQLDIG
PNKVRIGVVQFSNDVFSEFFLKTYSTKDAVIQALRRLRYRGGSPLNVGKALDFVVRHHFV
KSAGSRREDGVPQHLVLLLGGRSQDDVSRPSIVIQSSGIKGLGVGARNADSAELQRITND
PRTVFVVKEFTQLPAIEKRFFASFEAPQEPTVIPPEIPTDGKKQADIVFLLDGSINFGRD
NFQKVVDFVYDIVDAIYEEGDSIKVGLVQYSSEVSDEFFLKDFSNKEQILEAVNKTVYKG
GRAAKTGSAIKHIQAKHFVKEAGSRADQRVPQIAFIITGGKPEDDGQTAVLSLAQKGVKV
FAVGVKNIDLGEVSKLSSDSTTAFRAATAQELSELNEAVLVTLNDVMKEQLCRGVGEVSR
DCSLDIILGFDVSDVGPGQNIFNLQRALESQVEDILNRITQLQRISCTRNQPPVVRVAIM
AQTPSGAVEAFDFSEYQPELFEKFQAMRNGGPYVLTAETLRSYQNKFRTAPGGSVKVVIH
LTDGIDGAKGQLAAASADLKREGVSALILVGLERVANFEEVMQLEFGRGFSYNRPLRVNL
LDLDFELAEQLDNIAEKACCGVPCKCSGQRGDRGLPGLIGPKGVPGENGYRGYPGDEGGP
GDRGPPGVNGTQGFQGCPGERGTKGNRGFPGEKGELGEIGLDGIDGEEGNRGHPGSPGER
GSPGRRGGKGIKGERGERGDHGLRGDPGTPGADNNQRGPRGQKGELGPMGERGRDGPTGP
PGDPGRTGGLGRRGPPGVKGNRGAAGLPGAAGKQGTRGPEGPPGQAGAPGLRGEQGIPGP
RGAGGLPGSAGERGRLGPFGKKGEPGDPGPKGPNGPPGPRGETGEDGRDGVGTAGAKGRR
GETGFPGYPGQRGAPGDSGTVGDPGPKGSRGHRGRAGEPGARGPRGERGYPGPSGLKGNK
GEARDECALIRNIKDKCPCCYGPRECPIYPTELAFAIDTSAGGRADVFNRTKQAVLTILN
DLTIAESNCPRGARVALVTYNSEITTEIRFADFRRKKNLVKKIEDLQIQQTSKQRNLEAA
MSFVARNTFKRARSGFLMRKVAVFFTHGPATTAASPQLNEAVMKLYDAGVVPVFLTSRED
RDLVNALQINNTIGGQAIVFAGGANQQAQALRRALTCHICLDVCDPDPSCGPQRAGFGRD
RRAAPTDVDIDVAFLLDSSDSTTPLQFREMKNYISYLVSQMALSSDPKASRHHARVAVIQ
HAPYEFESNSSASPVKVELSLTDYASKEQLMDFISNQMVQLYGTRAVASAIEYTTRHIFE
SAPNPRDLKVFVLMMTGEVKNGELEHLQKVIAEAKCKGYFFVIVGIGKKLNIKNIYSLAS
EPNDVFFKYIDKPSEFNEEPLLRFGNLLPAFISSENAFYLSPEVKKQCDWLQADQPVQKF
GQKQINVPNNVTALPSTTRKPEDNDFGFPSAESMPLPKLPSAAKANLIVNAEPLQGPETD
PCLLDLDMGTQCKEYQVKWFFDYKNKICTQVWYGGCGGNANRFETEADCINKCLKPSDET
VMQLPVLAKSHLSGQKVPKKKVPRRKLSRRKLESRAKNIARAVKDICMLEKKVGPCRNFT
LKWSFDPARRSCTRFWYGGCDGNENRFNTQKECENLCMSALEKPSIATTIGT
NT seq
8799 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgatatttgcccttagcagctatcttttgtcttttactctcaggatat
catatggctgatgcccagcagcaaggagctaatgtcaaaatcggtgccgctgctgatata
atatttctagtggattcttcttggagcattggaaaggaacatttccaacttgttcgggag
tttctgtatgatgttgtaaaacaattagatgtgggtgaaaatgattttcggtttggtctg
gtccagttcagcggaagcccacatacagagttccagttaaacacgtatcatactatgcaa
gaagtgctctcccatatttcacacatgccttatatggggggtggaaccaagactggacaa
ggattagagttcctaattcggaaccatctaactaaagctgctggaagcagagtgagtgat
ggcaccccccagataattatagtcttaacggatggacgatcccaagatgatgtgactctg
ccatcatctgttcttaaatctgctgatgtaaacatgtttgccattggagtgcaggaggca
gtggaaggggaattaaaggaaatagcaagtgatccccttgatatgcacctgttcaaccta
gagaactttactgctctccacggcattgtgggagacttagttgcaagtattcgctcatca
gtgactccagaaatgcctggagcaaaaggcgagattaaagacatcacagcgcaagaatct
gctgacattattttccttattgacggatcaaacaacatcggcgctgtcactttcgcagct
atccgtgatttcattgcaaatttaattgaaagactatcagttggagctgagctcatacgc
attggggtggtgatgtatagtgatcgacccagaactgttttcttcttgaacagctacacc
caaaaatctgatgttctagatgcagtgaaggcccttagcgcactcggtggcgaggaagct
aatactggggaagctcttgagtatgtggtgcaaagccacttcacccggtcagcaggcagc
aggatagaggaaggtgtgccacaggttttggtgctgataagcggcagtgaatctagcgat
gacattagagaaggggttttagccatgaagcaagctagtatattctcatttagcattggg
gtccaaagtgctgacaatgcagagcttcagcaaattgctactgatggaagcttcgtattt
actgccctggacacaagtaaccttgccgaacttcaagaactgttactgccaaacattgtt
ggagtggcccaaaggctcattttgttagatgccccaaccgttcttacagaagttgttgaa
gtcaataagaaggacatagtcttcctgatagatggcagcacagccttgggaaatgcccct
tttaatgcaattcgtgatttcattgccaaaatcatcaacagacttgaaattggaccggac
ctgatccaagttgcagtggcacaatatgcagaaactatgaaaccggaattttatttcaat
actttccaaacgaaaaaagaggtccttaccaatgttaggagaataaagccagtcggtggc
gctccgcttaatacaggttctgctctgaggcttgttaaaaacgagttctttaccagtggt
gctggatgcaggatcgatgaaggcgtcctaccaatgttggtccttattactggtggtaag
tccagagatgatgttgcccaaccagcacaagaagtgaaaaggaacggcatagtgatcctt
gccgttgggtcccgaaatgcagaccgtgctgaactggaacaaattgcctatggaccaagc
ttcgtatttactcccagtgagttccgcactgtcacactgcaaggtattctccctgatatt
gtgactcctatacggacgctgtctggatcttctgtgcaaacaacatcagaagttctgtta
agcaaaagggatatcatctttcttttggatggatcagtcaacgttggaaataccaacttc
ccatttgtccgtgactttcttgtgaacctagttaactcccttgatgttggaattgatgaa
gtacgagtcggcctagtgcaatttaaaagcaagattgatattttattcttgattgatggg
tcaacaaatcttgccggtcaggttgctgcagttcgagattttttggtccgaattatatct
gacttgaatgtggggcccgatgccgtacgtgtcgctgtggcacagtttagtgacaatgta
caacttgagttcaatttccatgacattccatccaaacaagaaatgcttcaaaagttgaaa
aagatgaagataaaatcagggaaactactcaacattggtgctgcattagattatgccacg
aggagtatctttgtgagcaatgcaggaagcaggattgatgaaggagtgccccaattctta
gtgctccttgcggctggaagatcaagtgacagtgtggatgacacagcggatgctttgaaa
caagctggggttgttacttttgttgtcaaaacccggagtgcagatccctcagaattagaa
aagattgtttatgaccctcagttcattataactgctgagtccctctctagacttggagac
atacaacctgaaatagtcagcctactgaaaaccattcagattaaacatccagttgatgaa
gctcagaagaaagacgttgtatttttgatagatggttcagatggtatcaggcgtagtttc
ccagaactgaagtcctttatactgaggatgattgataatctggatattggccctgacaaa
gtccgggttgctctggcccaacacagcaatactataaaaccggagttccttctgaatgag
tacttggacaaggcagatataatccaggctatccagagagtgtctgctatgggaggttct
ccagttaacacaggagctgccatcaactaccttattagccatgtgttcacacaacaggct
ggaagcagagtatctgaaggtgtcccacagttcttgatactggtgaccgctgagaagtca
acagatgatatccgaaggcctgccatggatctgaagacaaagggagctgtgccgtttggc
atcggcatcggcaatgcagatatcactgaactccgggcaatttcgtatgttcctgaattt
gcactccttgtttctggtgtcagcgaattgaataccgtacaggaactcattgccgacaga
gtgactcggctgaccagggcagaaatagacgctttgaggccatcatcccctgattcaggg
gatataaaaagagatgttgtattccttattgatggctcgaagtctgcagctggtgaattt
aattctattattgaatttattgaaagactcgtaaacaatctgaatgtgggttctgataac
actcgtgtagctgtgattcaattcagtgaagatcccaaggttgaatttcttttgaacgca
cactctaccaaggatgaggtacaagctgcactaagaaggctgagacccaaaggagggaac
aaagtgaatgcagggtccgctatagaatatgtgtcaagaaatatatttaccaggccttca
ggaagccgcttagaagagggtgcccctcagtttttaatcctctttctttcccgtgatcct
gacgatattgtagaggattctgcagttgaagtcaagcgagttggtgtggcatcacttcct
attggaaagaatgtggatcgtgaagaaatggtcaaaatagctcttagccccgaatatgta
tttcaggtgtcagcttttcgccacctgcctaatctggagcagaaactgataacccctatc
acaacactaaccgcacagcagataaatacactcattggtgatgtatcagtaattccagat
attgatagtgaagcaaaagacattgtcttccttattgacagctctgccaatgttgtgcca
aatgacctccctcacattcgtgatttcatcatcagaattgtccagcagttagacattgga
ccaaacaaagtgagaattggtgttgtccagttcagcaatgatgtattttctgagttcttc
ttaaaaacctactcaaccaaagacgctgtgatacaagccctgcgccgtttgcggtacaga
ggaggttctcctctgaatgttgggaaggctctggactttgttgtgaggcaccactttgtg
aaatctgcaggaagcaggcgagaagacggagtcccacagcacttagttctcttgcttggg
gggagatcccaggatgatgtcagcagaccgtccattgtgatacagtcctctgggatcaag
ggtctgggtgtaggagcgaggaatgcagacagcgcggaactgcagaggattaccaatgat
cctagaactgtgtttgttgtgaaagagtttacccagctcccagcaatagagaaacgattc
tttgcatcatttgaggcacctcaagaaccaacagtaatacctcctgagatccctactgat
ggtaaaaaacaagcagacatcgtctttttgctggatggttccatcaactttggaagagac
aatttccaaaaagtcgttgactttgtgtatgacatagttgatgctatttatgaagaaggg
gattccattaaagttggcttagtgcaatacagctcagaagtgagtgatgaattctttctg
aaggatttctccaacaaggaacagatcctagaggcagtgaataaaacggtgtacaaagga
ggcagagctgctaaaactggatcagccatcaagcacatccaagcaaaacactttgtgaag
gaggctggcagcagggcagaccagagagtcccacagatcgcttttattataacagggggc
aagcctgaggatgatgggcagacggcagtcttgtcactggctcagaagggtgtcaaggta
ttcgcagttggcgtgaaaaacattgacctcggtgaggtttccaaactctccagtgacagc
accacagcctttagagctgcaacagcccaggaactctcagagctgaatgaagccgtgctg
gttacgttgaatgatgtcatgaaagagcagttgtgccgaggtgtgggagaagtctcaaga
gattgcagtttggatattatactgggatttgatgtctcagatgttggaccaggacaaaac
atattcaatctgcagagagcacttgaatcacaggttgaagacattctgaacaggatcact
caactgcagagaattagctgcactcgcaaccagcctccagttgtgcgcgtggccatcatg
gcacaaaccccctctggggctgtggaagcgtttgacttttctgagtaccagccagagctg
ttcgagaagttccaagccatgcgtaacggtggtccatatgtcctaactgcagagacactc
agatcctatcagaataagttcagaacagctcctggtggaagcgtgaaggtggtgatacac
ttaactgatggcattgatggtgctaaaggacagttagcagctgcatctgctgatctgaag
agagaaggcgtcagtgctctcatccttgtaggattggaacgagtggcaaattttgaggaa
gtgatgcagctggaatttgggcgtggctttagttataatcgccctctccgagtaaatctg
ctggatctagattttgaattggcagaacaactggataacatcgcagaaaaggcatgctgt
ggtgtgccatgcaaatgttctggacaacggggagacagaggattgccaggtttaattgga
ccaaagggagttccaggggaaaatggatacagaggctatccaggagatgaaggtggaccg
ggtgatcgtggaccaccgggggtcaatggaactcagggattccaaggctgtccaggagag
agaggaactaaggggaatcgtggattcccaggggaaaagggcgaattgggagagattggt
cttgatggaatagatggagaagagggaaacagaggacatccaggttctcccggagagagg
ggaagccctggcagacgcggtggtaaaggaatcaaaggggaaagaggagaaagaggtgac
cacggactgcgaggagatccagggacgccaggagctgataacaaccagagaggacccaga
ggccaaaagggtgaactcggaccaatgggagaacgcggaagagacggacctacaggcccc
ccaggagatcctggaaggactggaggacttggcagaagaggacctccaggagtcaaagga
aacagaggtgcagcaggactaccaggagctgcaggaaaacagggtacaagagggccagag
ggtccacctggccaagctggagcacctggtcttcggggagagcaaggcattcctggccca
aggggtgctggaggtctacctggttctgctggggagcgtggcagacttggtcctttcggt
aaaaaaggtgaacctggtgaccctggtccaaaggggcccaatggtccacctgggcctcga
ggagagacgggagaggatggtcgagacggagtcggcacggctggtgctaaaggcagaagg
ggagaaactggtttcccaggatatcccggacaaaggggtgcacctggagactctggtact
gttggtgatcctggccccaaaggaagcagaggtcacaggggaagggcaggggaacctggt
gcacgaggcccaagaggagagagaggatacccaggaccaagtggacttaagggtaacaaa
ggagaagcaagagatgaatgtgcacttatacgcaacatcaaagacaaatgcccttgctgt
tatggtccaagagaatgcccaatatatccaacagaactggcatttgctatagatacctct
gctggtggaagggcggatgttttcaacagaacgaagcaagctgtgctgacaattcttaat
gatctcacaattgctgagagcaactgtccacggggtgcccgtgttgcattagttacatac
aacagcgaaatcaccactgagatccgtttcgctgacttccgaaggaagaaaaaccttgtg
aaaaagatcgaggacctccaaattcagcagacatcaaaacagcgaaatctagaagctgca
atgtcctttgtggccaggaatacattcaaacgtgcacgtagtgggttcctcatgaggaag
gtggctgttttcttcacccatgggccagcaacaacagcagcatctccacaactgaatgag
gctgtgatgaagctctacgacgctggagtcgtgcccgtgttccttaccagcagagaggac
agggaccttgtaaatgcactgcagatcaacaacactataggtggacaggctattgtattt
gctggtggtgcaaatcaacaggcccaagctcttaggagagcattaacatgccatatttgt
ttagacgtgtgtgatcctgatcccagctgtggtccccaaagggctggctttggtagagac
agacgggcagcccctacagatgttgacattgatgtagcattcctcctggatagctctgat
agcactactccactgcagttcagagagatgaagaactacatttcatacctagtaagccag
atggctctgagctccgatcccaaggcatcccggcaccatgccagggtagctgtcatccaa
catgctccttatgaatttgaatcaaactcaagtgcatctcccgtcaaagttgaattgtca
ttgacagactatgcatctaaagaacagctgatggatttcattagtaatcaaatggtgcag
ctgtatgggacacgagctgtggcaagtgcaatagaatatacaacaagacacatttttgag
agtgcacctaatcccagagatctcaaagtctttgtcttgatgatgacaggagaagttaaa
aatggagaactggaacaccttcagaaagttattgcagaagctaaatgcaaaggatacttt
tttgtcatagtaggcattggtaagaaacttaacatcaagaatatctacagtttggcaagt
gagcctaatgatgtcttcttcaaatacattgacaagccatccgagtttaacgaagagccg
ttgttacgctttggaaacctcttgccagcctttatcagcagtgaaaatgccttttacctg
tctccagaggtcaagaaacaatgtgactggctccaggctgatcagccagtccaaaaattt
ggtcagaaacaaataaatgttccaaataatgttactgccttgccttctacaacaagaaag
ccagaagacaatgactttggctttccttctgcagagagcatgcccctgcccaaattacct
tcagcagctaaagcaaatctgatagtgaatgctgagccattgcaaggacctgaaacggat
ccttgcttgctggaccttgacatgggcacacagtgcaaggagtatcaggttaagtggttc
tttgactacaaaaacaagatctgcacccaggtttggtatggtgggtgtggtggtaacgcc
aatagatttgagacagaagctgactgcattaacaaatgcttgaagccatcagatgagaca
gtcatgcagctgcctgtccttgcgaaaagccacttgtcaggacagaaagtgcccaagaag
aaagtacccaggaggaaattatccagaaggaaattggaaagcagagcaaaaaacatagca
agagcagtgaaagatatctgtatgttggagaaaaaagtaggaccctgcaggaattttacc
ctgaaatggtcctttgacccagcacgcagaagctgtactagattctggtatgggggttgt
gatggaaatgaaaacagatttaacacacaaaaagaatgtgaaaatctctgcatgtcggcc
cttgaaaaacctagcattgcaacaacaataggaacctaa
DBGET
integrated database retrieval system
