Varanus komodoensis (Komodo dragon): 123028386
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Entry
123028386 CDS
T07701
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04510
Focal adhesion
vko04512
ECM-receptor interaction
vko04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123028386 (TNC)
04518 Integrin signaling
123028386 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123028386 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vko00536
]
123028386 (TNC)
Glycosaminoglycan binding proteins [BR:
vko00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123028386 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF7949
NDNF
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
123028386
NCBI-ProteinID:
XP_044296089
Ensembl:
ENSVKKG00000016576
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MGVPAWALALVTFSLFHQHISGGLIKRIIRQKRDAGINVTLPEDNKSVVFNHVYNIKVPV
GSLCSVDLDPTSGDAELPSQIEPSSNYQEHTLNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEELVSSLRNQCASGAGCCPSAQPVEGRIDTTPYCSGHGNYSNDICGCVCES
GWKGPNCSEAECPWNCNRRGRCVLGKCICEQGYTGDDCGQLTCPGDCNDQGKCVDGQCVC
FDGFAGEDCSEEFCLVPCSEHGRCVNGQCVCEEGFGGADCGQPLCLNNCHNRGRCVEEEC
VCDEGYTGEDCGELICPNDCFDRGRCVNGTCYCEIGFTGEDCGKVRCPGDCHGRGRCVDG
QCVCEESFTGEDCSERRCPGDCSNRGRCLHGQCECDEGFMGPDCGELKCPGDCHGRGRCV
NGQCVCDEGFVGEDCGERRCPGDCHNRGRCVEGRCVCDEAFTGPDCSELRCPHDCNGQGR
CVNGQCVCDEGYTGEDCAERTCPDDCHSRGLCINGSCVCNEGFVGLACEELACMNNCHSR
GRCVNGQCVCDEGFAGADCGQRRCPKDCSGRGQCIDGVCVCDEGYHGPACGQRSCPNNCN
NLGRCVDGQCICEEGYIGDDCSDISPPKDLTVLDVTDKTINLEWDNENVVTEYLISYTPT
GTGGLEMQFRVPGNQTSATIRELEPGVEYFIHVFAILKNKKSIPISARVATYLPAPDGLK
FKLVKETTVEVEWDPLDIPFSGWEIVFNSMKEEDNGGIRSSLKRPQTSYIQPGLAPGQQY
NVSLYVVKNQIRGPGLSKVVTTKLDAPSQIEAKDVTDTTALLTWFKPLAQIDGLELTYGP
KDAPGDRTSIDLSEDESQYSIGNLKPHTEYEVTLVSRRGDMESDPMKETFFTDLDSPRNL
KRLSQTDSTIVLEWRNSQATPEIYRIKYAPLSGGDHAEITVARSNQTTTKATLTGLRPGT
EYGIGVTAVKQDKESAPATINAGTDLDRPKDLEVTDPTETTLTLRWKRPLAKIDRYRLTY
TTPSGKKNEIEIPADGTSHILRSLDAGVEYTINLVAEKGRHKSKPSSVTGTTEAEPELGD
LSFSKVHWDGFQLTWTAAEGAYESFLIQVQEPNQAEDVRNVTVPGSFRSVNLTGLLPNTL
YTVILYGVTQGYKTKPLSVESTTAMKPEVGDLTIGGITPESFNLSWTTTNGNFDLFIIEI
IDSNRLLEPMEYNISGHLRNAYISGLSPKTDFIIYLYGVTRGFRTPALTATATTEAEPEV
DNLLVSDATPDGFRLSWTADDGAFDSFVLKIRDTNRLSDPLELIIPGHERTQDITGLKEG
TEYSIDLYGVTSGRRSQPVNALGTTVMGSPKEITFSDITENSAVVSWTAPRTRVDNFRIS
YIPVTGGPPNSVAVDGAKNRIKLVKLIPGVEYVVSIVSVKGFEESDPASGSLITALDSPS
GLKAVNITDSNALAIWQPAIAAVDEYIISYITEGEPEVTHSVSGNTVEYDLIGLRPASEY
TLRIYAVKGPQKSSIISTKFVTGLDAPRDLTAMDIQSETAVLKWKPPRASVTGYLLIYES
IDGKVKEVILGPEATSYSLSELSASTQYTVKLQALNQSLKSKIIQTVFTTTGLLYPHPRD
CSQALLNGETVSGLYTIYLNGDQSQPVQVYCDMSSDGGGWIVFLRRQDGAEDFYRNWRTY
EAGFGDPKGEFWLGLDNLHKITSQGQYELRVDLRDHDETAYALYDRFTVGDARTRYRLKV
DGYSGTAGDSMMYHNGRPFSTFDKDHDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSH
SQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRQKRA
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccagcatgggcactagccctggtgaccttctctttattccatcaacacatc
agcggtggactcatcaagagaataatccggcagaagagggacgctggaatcaatgtgaca
ttgccagaggacaacaagtccgtggtcttcaaccatgtctacaacattaaggtccctgtg
ggttccctttgctcagtggacttggacccgacgagtggtgacgcagaactcccctctcag
atcgagccgagcagcaactaccaggagcacacgctgaacgaggagaaccagattgtcttc
acgcacaggatcaacatcccacggagggcttgtggctgtgcagctgctccggacatcaag
gaccttctcagccggcttgaggaactcgaggagctggtttcatctctgaggaatcagtgt
gccagtggagctgggtgctgccccagtgcacagcccgtggaaggtcgcattgataccacc
ccctactgcagtggccatggaaactacagcaacgacatctgtggctgtgtttgtgagtcc
ggctggaaagggcccaactgctcggaagcggagtgtccctggaactgcaacagaaggggc
cggtgtgtcctgggcaagtgcatctgcgagcagggctataccggggacgactgcgggcag
ctgacgtgtccaggggactgcaacgaccaaggcaagtgtgtcgacgggcagtgcgtgtgc
ttcgacggctttgcgggagaggactgcagcgaggagttctgcctggtgccctgcagcgag
cacgggaggtgcgtgaacgggcagtgcgtgtgcgaggagggcttcggcggcgcagactgt
ggccagcccctgtgcctcaacaactgccacaaccggggacgctgcgtggaagaggagtgc
gtgtgcgacgaaggctacaccggggaagactgcggcgagctgatctgccccaacgactgt
ttcgaccgcggtcgctgcgtcaacgggacctgctattgcgaaatcggcttcaccggggag
gactgcggcaaggtgcggtgccccggcgactgccacggccgtgggcgctgtgtggacggc
cagtgcgtgtgcgaggagagcttcacgggcgaggactgcagcgagcggcgctgccccgga
gactgcagcaaccggggccgctgcctccacgggcaatgcgagtgcgacgaggggttcatg
ggcccggactgcggagagctgaagtgccccggcgactgccacggccgcgggcgctgcgtc
aacgggcagtgcgtgtgtgacgagggcttcgtgggcgaggactgcggcgagcggcggtgc
cccggcgactgccacaaccgggggcgctgcgtggagggccggtgcgtgtgcgatgaggcc
ttcacgggccccgactgcagcgagctgcgctgcccccatgactgcaatggccagggccgt
tgtgtcaacggccagtgcgtgtgcgacgagggctacacaggggaggactgtgccgagcgg
acgtgccccgacgattgccacagccgcgggctgtgcatcaatggctcctgcgtgtgcaac
gagggctttgtgggcctcgcgtgtgaggaactggcctgcatgaacaactgccacagccgc
gggcgctgcgtcaacgggcagtgcgtctgcgacgaaggcttcgccggcgcggactgtggc
cagcggcggtgccccaaggactgcagcggccgagggcagtgcatcgacggggtgtgcgtg
tgtgacgagggctaccacgggccggcctgtggccagcggtcttgccccaacaactgcaac
aaccttggccgctgtgtggatgggcagtgcatctgtgaggagggctacataggagacgac
tgctctgacatatctcctccaaaggatctgacggttctagatgtgacagacaagaccatc
aacttggaatgggataatgaaaacgtcgtcacagaatacctcatcagctataccccgacc
ggcactggaggccttgagatgcagttccgtgtccctggcaaccaaacctcggccaccatt
cgcgagttggagcctggtgtcgaatatttcatccatgtctttgccatcctgaagaacaag
aagagtatccccattagtgcccgggtggccacttatttgccagccccagatggcttgaag
ttcaaattggttaaggaaacaacagtagaagtggagtgggaccccttggacattccattc
agtgggtgggagattgtctttaacagcatgaaagaagaggacaacggcggaataagaagc
agtttgaagagaccacagacatcatacatacaacctggcctggctccaggacaacaatac
aatgtgtctctttatgttgtgaagaatcagatcagaggacctggcctctctaaggtggtg
accacaaaacttgatgcccccagtcagatcgaggcaaaggacgttacagatactactgca
ctgctcacgtggttcaaaccattggctcagatcgatggccttgagttgacctatgggccc
aaagatgctccaggggaccgaacatccattgacctctctgaggatgaaagccagtactcc
attggaaatctgaagccacacacagaatacgaggtgacgctggtgtcccgtcgtggagac
atggaaagtgaccccatgaaagaaacctttttcacggatctggattctccaaggaatctg
aaacgcctctctcagacagatagcacgattgttctggagtggaggaacagccaggcaact
cctgaaatttacaggatcaagtatgccccgctttctgggggagatcatgctgagatcacc
gtggccaggagcaaccaaaccacaaccaaagctacactcacaggtttaaggcctgggaca
gaatatggcattggtgtaacagctgtgaagcaagacaaggaaagcgcacctgccaccatt
aatgctggaactgatctggacagacccaaggacttggaggtcaccgatcctacggaaacc
acactcaccttgcggtggaaacgacccctagccaaaattgaccgttaccgccttacgtac
acgacgccgtcggggaagaaaaatgaaatagagattcctgcagatggcacctcacacatc
ctgaggtctctagatgctggggtggaatacaccatcaacctggtggcagagaaaggcaga
cataagagcaaaccttcgtcagtgactggcaccaccgaagcagaacctgagctgggggac
ttatcattctcaaaagttcactgggatggattccagctcacctggacagcagcagaaggt
gcctatgagagctttctcatacaggtgcaggagcccaaccaggcagaagacgtgagaaat
gtcaccgttccaggcagcttccgctctgtgaatctcactggcctcctgccaaacactctt
tatacggtcatcctttacggtgtaactcagggctacaaaacaaaacctctctcagttgaa
tctactacagcgatgaagccagaagtcggtgatctaactatcgggggcattactcccgaa
agcttcaacctttcctggacaaccaccaatgggaacttcgatctctttatcattgaaatt
attgattctaacaggttgctggaacctatggaatataacatctcaggccatttacggaat
gcttatatctcagggctctcccccaaaactgatttcattatctacctctatggagtcaca
cgtggcttccgtacaccggcattaacggccactgctaccacagaagcagaacctgaagtg
gacaaccttctggtctcggacgctaccccagatggtttccgtttgtcttggacagcagat
gatggggcctttgacagttttgttcttaaaatcagggataccaacaggctatcggaccct
ctggagttaatcattccaggccatgagcgcacccaagatatcacagggctgaaagaaggc
actgaatattccattgatctgtatggcgttaccagcggacggcgttcgcagcctgtaaat
gcattgggcaccacagtgatgggatctcccaaggaaatcactttctcagatattactgaa
aactcagctgtagtcagctggacagcaccaaggactcgtgtggacaactttcggatctcc
tatattccagttactggaggtccccctaattctgtggctgtagatggggccaagaatagg
atcaaactggtgaagctgatccctggtgtagaatacgttgtcagcattgtctcggtcaaa
ggatttgaggaaagcgaccctgcatcgggatctctgatcacagctttggacagtccatca
ggactgaaggccgtgaatatcacggattccaatgctctggctatctggcagcccgcaata
gctgccgttgatgagtacataatttcctacatcactgagggcgagccagaagtgactcac
agtgtctccggcaacactgtggaatacgatctcattggcctccgcccagcatctgaatac
acacttcggatctatgctgtgaagggaccacagaaaagctcaatcatctccaccaaattc
gtaacaggcctcgatgcaccaagagacctgactgccatggatattcagtcggaaacagca
gtgctaaagtggaagccaccccgtgcctctgtcacgggttacctcttgatctatgaatcc
attgatggcaaggtcaaggaagttatcctgggaccagaggcgacttcctacagtttgtct
gaactgagtgcatccactcagtacacagtgaagctgcaggcactaaaccagagcttaaag
agcaagatcatccaaactgttttcaccacaactggacttctgtaccctcatcccagagac
tgctcccaggctctgctgaatggagaaaccgtgtctggtctctacacaatttatcttaac
ggggatcagtctcagccagtgcaagtgtactgcgacatgagttctgatggaggtggatgg
atcgtgtttctaagaaggcaggatggagcagaagacttctacaggaactggaggacttac
gaggctggttttggagaccccaagggtgaattctggctaggtctggataatcttcacaaa
atcacttcgcagggccaatatgagttgcgtgtggatttgcgggatcatgatgagactgca
tatgcgctgtacgataggttcactgtaggggatgcaaggactcgctatcggctgaaagta
gacggctacagtggcacagcaggtgattccatgatgtaccacaacggacggcccttttcc
acttttgacaaggaccacgattcagccatcaccaactgcgctttatcttataaaggggct
ttctggtacaagaactgtcaccgagtcaacctgatgggcagatatggggacaacagccac
agtcagggtgtcaactggttccactggaaaggccacgaatactccatccagttcgccgag
atgaaactaagaccctccaacttcaggaatctagaagggagacaaaagagagcataa
DBGET
integrated database retrieval system