Vulpes lagopus (Arctic fox): 121489389
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Entry
121489389 CDS
T07435
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121489389 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121489389 (TTC37)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
121489389 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_17
TPR_14
TPR_11
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
ARM_TT21_C
ARM_TT21_2nd
Sel1
Fis1_TPR_C
TPR_15
TPR_30
TPR_5
ARM_TT21_5th
TPR_20
BTAD
Retrotran_gag_2
TPR_6
Motif
Other DBs
NCBI-GeneID:
121489389
NCBI-ProteinID:
XP_041608348
LinkDB
All DBs
Position
4:73880208..73961265
Genome browser
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELQQLWRKLTQLLAESTEDQNNETQQ
LLLTAFENALGLSDKIPSEDHQVLYRHFIHCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGQQYCCRLVEMDSKSGPGFIGLGIKALQDKKYEDAVKNLTEGLK
ESPLCTTGWYHLAEAQIKMHRPKEAVLSCNQALKNIDNLGVSAGSLHQKNLCLRLKAEAL
IKLSNYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWFMDEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYKKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHQADVSCLWKLV
GDACTSLYAVSPSKVNVKVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQNLTETGNNTNDLKELLEKSLHCLKKAVRLDSKNHLYWNALGVVSCYNGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLASENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELNMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIVQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLKKEAADAYRRAMLLLQTTEDQDTYN
VAVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTIESLQALCALGLTMQDATL
SKAALNELLKHVKQKDSDYQKCLLTSAIYALQGRSVAVRRQASKAVHSNPADPALWSLLS
RVVAQYTHQSAKAGAIAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAETEKNLALKTIQ
KAALLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLALLSAVSASLKDKEFLKDY
NQCLEKWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLKLALLALKVCMAKNSNDHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLERVIYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagtgctagagatgctatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagaccgtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagttagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattactggcttggcaggggtta
gcaagcttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttac
cagaagctcttggatctttatgaaagtgttgacaaacagaagtggtgcgatgtctgtaag
aaacttgtggacctatattaccaagaaaagaaacatgtagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagcttcagcagctatgg
aggaaattgactcagttgctggctgagagtactgaggatcagaataatgagacccagcaa
ttgcttttaacagcttttgagaatgcactgggcttatcagataagattcctagtgaagat
caccaagtactttatagacattttattcactgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttaattgaatcaggcagtcttactgatgaagggcagcagtat
tgttgcagattagtagaaatggattccaaaagtggcccaggcttcattggtttaggcatt
aaagcattacaagacaagaagtatgaagatgctgttaaaaacctaacagaaggtttaaag
gaaagccctctttgcacaactggatggtatcatctggcagaagcccaaattaaaatgcat
agacctaaggaagctgttctttcttgcaatcaagctctgaagaatatagataatcttggt
gtgtctgctggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcaaattatgaatcttcagtggaagcaatttgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaacaaaggc
tcgttagatgaagcttcaaagattatggaagaccttctttcttcttaccctgacctagct
gaagttcatgccctggaggctttgattcattttaccaaaaaagactatctacaagcagag
aaatgctttcagagagctcttgagaaagatgctgaagttgctgaatatcattatcaactt
gggttaacatattggttcatggatgaagagacaagaaaagataaaactaaggctcttacc
cactttctaaaggctgccaggctggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaagaaagct
tttgaattagatgatactgatgctgaatctggagctgcagcagttgacttaagtgtggaa
cttgaagagatggaaacagccttagctattctaacaacagtaactcagaaggcaagtgct
ggaacagcaaaatgggcctggcttaggcgaggactatactatttgaaagctggtcaacat
tctcaagctgtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcctacttaagcagaggtggctataccacagctttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcagtaccagctgatcattaaa
aagaaagaagattatgtgccggctttgaaaggtttgggcgaatgccatctcatgatggca
aaagcggctctagtcgattatcttgatgggaaagctgtagactacatagaaaaagcactg
gaatactttacttgggctctgcagcatcaagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccgtctaaagtgaatgttaaggtttta
ggagtcctgctaggtcagaaagaaggaaaacaagtattaaagaagaatgagctcctccat
cttggaggaaggtgttatggtcgtgcattaaaactgatgtctacatctaatacttggtgt
gaccttggaattaattattatcgccaagcacaaaatctcacagaaacaggcaacaataca
aatgatctaaaagagttgttggagaaatctttacattgtctgaaaaaggcagtgagactt
gacagtaaaaatcacttatactggaatgcacttggtgtggtttcatgttacaatggtatt
ggaaattatgcccttgctcaacactgtttcatcaagtcaattcaatcggaacaaattaat
gctgttgcatggaccaacttgggagtgttataccttgcaagtgaaaacattgagcaagct
catgaagctttcaaaatggctcagtctctcgatccatcttatttaatgtgctggattgga
caagctcttattgcagagacagttggaagttatgacaccatggatctttttaggcacact
acggaactcaatatgcatactgagggagcaataggttatgcgtactgggtttgtacaaca
ttgcaagataaaagcaacagagatacagagctgtaccggtacaacatcgttcagatgaat
gctattccagcagcacaggttgttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaggaagccgca
gatgcataccgaagggcaatgttattattacagactacagaagaccaagatacttataat
gttgcagtaagaaattatggcagattgttatgttccattggtgaatatgataaagccatt
caggcttttaagtcaacaccccttgaggagttagaagacatcataggttttgcactggct
ttatttatgaaaggcctatataaagaaagcagcaaagcctatgagagagccttgtctatt
gttgaatcagagcaggacaaagcccatatcttgacagctctggcgataacagagtataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaacca
accatagaaagccttcaagccctgtgtgctctaggattgacaatgcaggatgctacattg
tcaaaagcagcacttaatgaattactgaagcacgtcaaacagaaagacagtgattatcaa
aagtgccttcttacttcagcgatttatgcactgcaaggccgcagtgtggcagtgaggaga
caagcatctaaagctgtccatagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtagttgctcagtatactcaccaaagtgcaaaggcaggtgctatagcaggaaatgtg
gctcatattttggattcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttagccatgggaagcagttcagcagaaactgaaaaaaaccttgcactaaagaccattcag
aaagcagctcttctttctccaggtgatcctgctgtctgggctgggctaatggcagcctgt
catgctgatgataaactggctctagtgaacaacactcagccaaagagaatggatttgtac
ttggcactgttatctgctgtttctgcttcacttaaagacaaagaattccttaaagattat
aaccaatgtcttgaaaagtggtctctctcccaagctgtcactggtctgatagacacagga
agaatatctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagcca
gctgttatcttgcttttgagacaagttcagtgtaaaccactcctggagtcgcaaaaacct
ctcccagatgctgtacttgaagagctgcagaaaacagtcatgtccaactcaacttctgtt
ccagcttggcagtggctggcacacgtatatcagtcacaaggaatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccaacagggcagttggagcgggaagctg
tcgagtctgttgaaactagctctgcttgctttaaaagtctgcatggctaagaattccaat
gatcactggtcatctttggttcaagaagctacaactgaggccttaaaactttgcttttgt
ccattggctgtctttttacaagctttgttacaattcaaccgcaaaatgggggcaagagag
acccgacgacttttggaaagagtgatatatcagcctgggtatcccaagtctatagtatca
actgcacgttggtatctactgagacacttacatgccaaaaatgactacgagctcattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagcattggaattgaatcagaaa
ttgtcctcacagtaa
DBGET
integrated database retrieval system
