Vulpes lagopus (Arctic fox): 121491474
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Entry
121491474 CDS
T07435
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04110
Cell cycle
vlg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121491474 (SMC1B)
04114 Oocyte meiosis
121491474 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121491474 (SMC1B)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121491474 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
121491474 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ATG16
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
121491474
NCBI-ProteinID:
XP_041612353
LinkDB
All DBs
Position
5:4420965..4493101
Genome browser
AA seq
1235 aa
AA seq
DB search
MGRLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSAYIAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHFLNT
ELEHVSRNLSVTKESLSRHENTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEEEILH
KGRDIELEASQLDRYKGLKEQVRKKVAIMTQQLEKLHWEQKADKERLAFERRRHGEVQEN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLI
RSELQNAGIDSHEGTRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVTSEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKEIKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKQLAAFYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKIDKVEDEIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKE
TIQKGREEIEDLKQVEEDCLQIVNELMAKRQQLKDIFVTQNANAEKVQAQIEEKRKKFLA
IDKEVGKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIEIILLLGSLDDIIEVELGTEAE
STQATVDIYEKEEAIEIDYSSLRDDLKALESDKEIEAHLKLLLQQVASQEDVLLKTAAPN
LRALENLKTIRDKFQESTDAFEASKKEARMCRQEFEQVKKRRYDLFSQCFEHVSISIDEI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADALIGVY
PEHDDCMFSRVLTLDLSQYPDTEDRENSKRNHESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctggaggtgctgcttgtggagaactttaagtcgtggcggggccaccaggtc
atcggccccttcaggaggttcacctgcatcatcggccccaatggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtcaaaaat
attcaagaactcattcatggagcacatattggaaaaccggtctcctcttctgcaagtgtg
aaaattgtgtatgtggaggaaagtggagaagagaaaacatttacaaggattattcgaggg
ggatgctcagaatttcattttgatgataatccagtgagtcgttctgcttacatagctgag
ttggaaaagataggcataatagttaaagcacggaactgtctagtgtttcagggaaccgta
gagtctatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagcttataggagagtatgaggaaaagaaaagaaaattacagaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagaacgcaaacatgcaaaa
ttagagaaagaagaggcagaacgttatcagagtctgcttgaagaactgaaaatgaataag
atacaattacagcttttccagctatatcataatgagaagaaaattcatttcctgaacact
gagttagagcatgtgagtaggaacttgagtgtcacaaaggagtctctttctcgtcatgaa
aacacagtgaaagccaagaagaaggaacatggaatgctaaccagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagacgtggctaagaaatcaataaag
gacagtgagaaacagtgttctaaacaggaagatgacataaaagccctggagacagagctg
gttgatttagatggtgcatggagaagttttgagaagcaggttgaggaagaaatcttacac
aaggggcgagacattgaactagaagccagtcagctggatcgttacaaaggacttaaggaa
caagtaagaaagaaagtggctataatgacccaacagctggaaaagctgcactgggaacag
aaggcggacaaagagagactggcatttgaaaggcggaggcatggagaagttcaggaaaat
ctaaaacaaataaaagaacagatagaagatcataaaaaacgaatagagaagttggaggag
tatacaaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
ggtgaaattgaaaacacaaaatcaagaatgtctgaagttaatgaagaattgaatcttatt
agaagcgaattgcagaatgccggaattgatagccatgagggaactcgtcagcaaaagaga
gcagaggttctggagcaccttaaaaggctttacccagattctgtgtttggaagactactt
gacctctgtcatcctattcataaaaaataccagctggctgttactaaactctttggccgg
tacatggttgccattgttgtaacctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaagaaagagctgaaccagagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagattaagggaaattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaagacatattgcatttggtggacctgagagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggagggtcaagcgacttaaaa
tacaaggctagatgctgggatgagaaggagataaaaaacttaagagacagaagagcccag
ctgatccaagaattaaaggatttaatgaagatacttcgcaaggaagcagatttgaaacaa
atacaaactctagtacagggaactcatacacgactcaaatattctcagagtgaactagag
atgattaaaaagaaacaacttgctgctttttaccgggaacaatctcaactacaaagtgaa
ctactaaatattgagtctcaatgtactatgttgagtgaaggaatcaaagaacggcaacaa
agaattgaagaatttcaagaaaagatagataaggttgaagatgagattttccaacacttt
tgtgaagaaattggtgtagaaaatattcgtgagtttgagaagaaacatgttaaacagcaa
caagaaattgatcagaaaaggttagaatttgagaaacaaaaaactcggcttaatgttcaa
cttgaatatagtcgcaatcagctgaagaagagactgagtaagatcaacacattaaaagaa
accatccagaaaggcagagaggagattgaggacctaaagcaggttgaagaagactgtctg
caaattgtgaatgaactcatggcaaagcggcagcagcttaaggacatatttgtcactcag
aatgccaatgctgagaaggttcaagctcagattgaagaaaaacggaagaaatttttggcc
attgacaaggaagtgggaaaatggcaaaaagaagttgtaatcattcaaacttctttggaa
cagaaacggctagagaagcataatctactgcttgactgcaaagttcaagatattgaaata
atccttttgttgggatcactggatgacatcattgaagtcgagttgggaactgaagcagaa
agtacccaggcgacagttgacatctatgagaaagaagaagccattgagatagactacagc
tctctaagagatgatttgaaggctctagagtctgataaagaaatagaggcccaccttaaa
ctcctactgcaacaagtagcatcccaggaagatgtcctgttgaagacggcagcccccaac
ctgagagccctggaaaacctaaaaaccatcagagacaagtttcaggagtccacagatgct
tttgaggccagcaaaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatatgaccttttcagccagtgttttgagcacgtttcaatctctattgatgaaatc
tacaagaagctctgcagaaacgtcagtgcccaggcatttcttagcccagagaacccagaa
gagccttacctagagggaattagctataactgtgtggctccaggcaaaaggttcatgcca
atggacaatctgtcagggggagaaaagtgtgtggcagcattagccctcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaac
acaaacattggcaaggtctcaagttacatcaaagagcagactcaagagcagtttcagatg
ataatcatttccctaaaagaggagttctattccaaagccgatgcgctgataggcgtctat
ccagagcatgatgactgcatgttcagcagagttttgaccctggatctttcccagtatcca
gacaccgaagaccgagaaaacagcaaaagaaaccacgagtcacgttaa
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integrated database retrieval system
