Vulpes lagopus (Arctic fox): 121497793
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Entry
121497793 CDS
T07435
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121497793 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121497793 (CNOT1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121497793 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121497793 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121497793
NCBI-ProteinID:
XP_041623439
LinkDB
All DBs
Position
8:107116805..107183210
Genome browser
AA seq
2348 aa
AA seq
DB search
MGGQVQIVNRHGPEADRHLLRCLFSHVDFSGDGKSSGKDFHQTQFLIQECASLITKPNFI
STLSYAIDNPLHYQKSLKPAPHLFAQLSKVLKLSKVQEVIFGLALLNSSSSDLRGFAAQF
IKQKLPDLLRSYIDADVSGNQEGGFQDIAIEVLHLLLSHLLFGQKGAFGVGQEQIDAFLK
TLRRDFPQERCPVVLAPLLYPEKRDILMDRILPDSGGVAKTMMESSLADFMQEVGYGFCA
SIEECRSIIMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSDGKDKS
DGAQAHTWNVEVLIDVLKELNPSLNFKEVTYELDHPGFQIRDSKGLHNVVYGIQRGLGME
VFPVDLIYRPWKHAEGQLSFIQHSLINPEIFCFADYPCHTVATDILKAPPEDDNREIATW
KSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALLQINTSWHTLRHELISTLMP
IFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRGEQYDQAKLSRILDVAQDLK
ALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSIL
GGLAPEKDQPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPP
PGVMPKGRPPSASSLDAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNLGSAFSTPQ
SPAKAFPPLSTPNQTTAFSAIGGISSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRK
LGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDE
VLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTY
MALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHL
QEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTV
AKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQTERIVEPPENIQEKIAFIFNNLSQ
SNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNE
TYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKG
QQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCK
NLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVKQPEELPPITTTTTSTTPATSTTCT
ATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPV
VDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTN
LKNSFASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFE
LRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDL
SQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLHAIPPTLAMNPQAQALRSLLEVVVL
SRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNK
QITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKI
LLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGP
NFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGI
LKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVK
HSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVL
ETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLL
IDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQL
RNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRS
PVTFLSDLRSNLQVSNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHM
DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVL
LERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQ
VMEGTGAS
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgggagggcaggtccagattgtgaatcggcacggtcctgaggcagacaggcatttatta
cgctgcctattttcgcatgtggatttcagtggcgatggtaaaagcagtggcaaagatttt
catcagactcagtttctgattcaggagtgtgcgtcgctgattacaaagccaaattttatc
tcgacgctgtcctatgccattgataatccattgcactatcagaagagtttaaaacctgca
ccccacttatttgcccagctgagtaaagttctcaagttaagcaaagtacaagaggtaatt
tttggccttgccctcttgaattcttccagctcagatctcagaggttttgctgcccagttt
atcaaacagaagcttcctgatcttctgcgttcttacattgacgcagacgtcagtggaaat
caagaaggtggcttccaagatatagcaatagaggttctacatctcctcctctcccatctc
ctctttgggcagaagggagcctttggagttggacaggaacaaatagacgcttttcttaag
acgctgcgcagagattttccccaggaacgctgtcccgtggtgcttgcaccacttttatac
cctgaaaaacgggacattctaatggacaggatcctgcctgattccggaggggtagctaaa
accatgatggagagctcgttggctgattttatgcaggaagtaggctatggcttttgtgca
agtattgaagaatgtcgcagtataatcatgcaatttggtgttcgggaggtcacagctgcc
caggttgccagggttttgggaatgatggctcgcacccattcaggattgacagatggaatt
ccattacagagtatctctgctcctggtagtgggatctggagtgatggaaaagataaaagt
gatggagcacaggcacacacatggaatgtagaagtcttgattgatgttctcaaggaattg
aacccgagtttgaatttcaaggaagtaacttatgaactggaccatcctggatttcaaatt
cgtgatagtaaaggacttcataatgtggtttatggcattcagaggggtttaggtatggaa
gtgtttccagtagacctcatatatagaccttggaaacatgcagaaggccagctctctttc
attcagcattcccttataaatccagagatcttctgttttgctgactatccctgtcatacg
gttgccactgatattctgaaagcaccaccagaggatgacaatcgagaaattgccacatgg
aagagcttggatttgattgaatctctgctgaggcttgcagaggtggggcaatatgagcaa
gtcaaacagctcttcagcttccctattaaacactgtccagacatgctggtattggcctta
ctacagatcaacacctcttggcacaccttgcgccatgagctcatctccacactgatgcca
attttccttggaaaccatcccaactctgctattattttgcactatgcatggcatggacag
ggacagtctccctcaatccgccaacttatcatgcatgcaatggcagaatggtacatgcga
ggggagcagtatgaccaggccaaattgtctcgaatacttgatgtggcccaagacttgaag
gccttgtcaatgctgctaaatggtactccatttgcctttgttattgaccttgctgcactt
gcttcacgtcgtgaatacctcaaacttgacaagtggctcacagataaaattcgagagcat
ggagagccttttatccaagcatgtatgacttttttaaagagacgatgcccttccattttg
ggtggacttgctccagaaaaagatcagcccaaaagtgctcaacttcccccagaaactctg
gcaacaatgttggcctgtttacaagcttgtgcagggagtgtttctcaggagttatcagaa
accattctcaccatggtagccaattgcagtaatgttatgaacaaggccagacagccacca
cctggagttatgccaaaaggacgccctcctagtgctagcagcttagatgccatttctcct
gttcagattgaccctcttgctggaatggcatctcttagtataggtggttcagctgcccct
cacacccagagtatgcagggttttcctccaaatttgggttctgcattcagtacccctcag
tcaccagcaaaagcatttccacccctttcaaccccaaatcagacaactgcattcagtgct
attggaggaatttcatcacagcttccagtaggtggtcttggcacaggcagcctgactggt
ataggaactggggctcttggactccctgcagtgaataacgatccttttgtacagaggaaa
ctgggcacctctggattgaaccagcctacattccagcagagtaagatgaaaccttcggac
ttgtctcaggtgtggccagaggcaaatcagcactttagtaaagagatagatgatgaagca
aacagctattttcagagaatatataatcacccaccacatccaactatgtctgttgatgag
gtattagaaatgttacagaggtttaaagattctaccataaagagggaacgagaagtcttt
aactgtatgctgaggaacttatttgaagaatatcgatttttcccccaataccctgataaa
gagttacatataacagcctgcctgtttggtgggataattgaaaaaggactggtcacttac
atggcattaggtcttgccctgcgatacgttcttgaagccttacgcaagccttttggttcc
aaaatgtattattttgggattgctgcactagatagatttaaaaatagattgaaggactat
ccccagtattgtcagcacttggcttctatcagtcactttatgcaatttccacatcattta
caggagtatattgagtatggacaacaatctagagatcctcctgtgaaaatgcagggctct
attacaacccctggaagtattgcactggctcaggcccaggctcaggcccaggttccagca
aaagctccccttgctggtcaggttagcacgatggtaaccacctcaacaaccaccactgtt
gctaaaacggttacagtcaccaggccaaccggagtcagctttaagaaagatgtgccacct
tctattaatactacaaatatagacacgttgcttgtggccacagatcaaactgagagaatt
gtagagcccccagaaaatatccaagagaagattgcttttatcttcaataatctctcacag
tcaaatatgacccaaaaggttgaagaactaaaggaaactgtgaaggaagaatttatgcct
tgggtttcacaatacctggttatgaagagagtcagtattgagccaaacttccacagcctc
tattcaaacttccttgacacgctgaagaaccctgaatttaataagatggttctgaacgag
acctacagaaacatcaaagtgctcctgacctctgataaagccgcagcaaatttttcagat
cgttctttgctgaagaatttgggacattggctaggaatgatcactctagctaaaaataaa
cccatcttacacactgacttggatgtaaaatctttgctgctagaggcttatgtaaaagga
cagcaggagttgctctatgtagtgccctttgttgccaaagtcttagaatctagcattcgt
agtgtggtttttaggccacccaacccctggacaatggcaattatgaatgtattagcagag
ctacatcaggaacatgacttaaagttaaacttgaagtttgaaattgaggtcctctgtaag
aaccttgcattagacatcaatgagctaaaacctggaaacctcctaaaggataaagatcgc
ctaaagaacttagatgagcaactctctgctccaaagaaagatgtcaagcagccagaagaa
ctccctcccatcacaaccacaacaacttctacaacaccagctaccagtaccacttgtaca
gccacggttccaccacaacctcagtacagctaccacgacatcaatgtctattcccttgca
ggcctggcaccacacattaccctaaatccaacaattcccttgtttcaggcccatccacag
ttgaagcagtgtgtgcgtcaggcaattgaacgggctgtccaggagctggtccatcctgtg
gttgatcgatcaattaagattgccatgactacttgtgagcaaatagtcaggaaggatttt
gccctggattctgaggaatctcgaatgcgaatagcagctcatcacatgatgcgtaattta
acagctggaatggctatgattacctgcagggaacctttgctaatgagcatatctaccaac
ctgaaaaacagttttgcctcagccctacgtactgcatccccacaacaaagggaaatgatg
gatcaggcagctgctcagttagctcaggacaattgtgaattagcttgctgttttattcag
aagactgcagtagagaaagcgggccctgagatggacaagagattagcaactgaatttgag
ctgagaaaacacgctaggcaagaagggcgcaggtactgtgatcctgttgtgttaacatac
caagctgagcggatgccagagcaaatcaggctgaaagttggtggtgtggacccaaagcag
ctggctgtttatgaggagtttgcacgcaatgtgcctggcttcttgcccacaaatgattta
agtcagcccacgggatttttagctcaacccatgaagcaagcttgggcaacagatgatgta
gctcagatttatgataagtgcattacagaattggagcagcacctgcatgccatcccacca
actttggccatgaatcctcaagcccaggctcttagaagtcttttggaggttgtagtatta
tctcgaaactctcgggatgccatagctgctcttggattgctccagaaggctgtagagggt
ttattagatgccacaagtggtgctgatgctgacctattgctgcgctacagggagtgccac
cttttggtgttaaaagctcttcaagatggccgggcatatgggtctccgtggtgtaacaaa
cagatcacaaggtgcctaattgaatgtcgggatgagtataaatataatgtggaagcagtg
gagttgctcattcgcaatcatttggttaatatgcagcagtatgatcttcacctagctcag
tcaatggagaatggtttaaattacatggccgtggcatttgctatgcaattggtaaaaatc
ctattggtggatgaaaggagtgttgctcatgttactgaggcagatctattccacaccatt
gaaactctcatgaggattaatgctcactccagaggcaatgctccagaaggattgccccag
ctgatggaagtagtgcgatccaactatgaagcaatgattgatcgtgctcatggaggccct
aactttatgatgcattctggaatctctcaagcctcagagtacgatgatcctccaggcctg
agggagaaggcagagtatcttctgagggaatgggtgaatctctaccattcagcagcagct
ggccgtgacagtaccaaagctttctctgcgtttgttggacagatgcaccagcaaggaatc
ctgaagactgatgacctcataacaaggttctttcgtctatgtactgaaatgtgtgttgaa
atcagttaccgtgctcaggcagagcagcagcacaatcctgctgctaatcctaccatgatc
cgagccaagtgttatcacaacctggatgcttttgtccgactcattgcactgctagtgaag
cactcaggggaagccaccaacactgtcacaaagattaatctgctgaacaaggtccttggt
atagtagtgggagttctcctgcaggaccatgatgttcggcagagtgaatttcagcagctt
ccctaccatcgaatttttatcatgctgctcttagaactcaatgcacctgagcatgtattg
gaaaccattaatttccagacacttacagctttctgcaatacattccacatcttgaggcct
accaaagctcctggctttgtgtatgcctggcttgaactgatctcccaccggatatttatt
gcaagaatgctggcacatacgccacagcagaagggatggcctatgtatgcccagctactg
atagatttgttcaaatatttggctcctttccttagaaatgtggaactcaccaaacctatg
caaatcctctataagggcactttgagggtgctgctggttcttttgcatgatttccctgag
ttcctttgtgattaccattatggattttgtgatgtgatcccacctaattgtattcagcta
agaaatctcatcctgagtgccttcccaagaaacatgaggctcccggacccattcactcct
aatctgaaggtggatatgttgagtgaaattaacattgcaccccggattcttaccaatttt
actggagtgatgccacctcagttcaaaaaggatttggattcttatcttaaaactcgatca
ccggtcacttttctgtctgatttgcgaagcaacctacaggtatccaatgagcctggcaat
cgttacaacctccagctcatcaatgcactggtgctctatgtagggactcaggccattgcg
catatccacaacaagggtagcacgccatcaatgagcacgatcacccactcggctcacatg
gacatcttccagaacctggctgtggacttggacactgaaggtcggtatctcttcctgaat
gccattgcaaatcaactgcggtacccaaatagccacactcactacttcagctgtaccatg
ctgtacctttttgcagaagccaacactgaagctattcaagaacagattacaagggttctc
ttggaacggttgattgtaaataggccacatccttggggtcttcttattaccttcattgaa
ctgattaaaaatccagcgtttaagttctggaaccatgagtttgtacactgtgccccagaa
attgaaaagttattccaatcggttgcacagtgctgcatgggacagaagcaggctcagcaa
gtaatggaagggacaggtgccagttag
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integrated database retrieval system
