Vibrio natriegens: PN96_11030
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Entry
PN96_11030 CDS
T04636
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vna
Vibrio natriegens
Pathway
vna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PN96_11030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_11030
Enzymes [BR:
vna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PN96_11030
DNA repair and recombination proteins [BR:
vna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PN96_11030
Prokaryotic type
PN96_11030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALR16469
UniProt:
A0AAN0Y1I4
LinkDB
All DBs
Position
1:complement(2409667..2410347)
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AA seq
226 aa
AA seq
DB search
MNQSPTWHDVIGEEKKLSYFVDTLNFVESERSAGKTIYPPSKDVFNAFRYTEFSDVKVVI
LGQDPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKELAQDIDGFEIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWEAFTDKVIEAINMHQQGVVFLLWGAHAQKKGRFIDRSKH
HVLTAPHPSPLSAHRGFLGCKHFSQANQLLTAQGKEPINWHLPMTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcaccgacatggcacgatgtgatcggcgaagaaaaaaaactcagctacttt
gtcgacaccttaaactttgttgaatcggaacgttcggcggggaaaacgatctatccgcca
agcaaagatgtgtttaatgcgtttcgctataccgagtttagcgatgttaaggtggtgatt
ttaggtcaggatccttatcacggtccgaatcaggcgcacgggttgtgcttttcggttttg
ccaggcgtgagaactccgccttcattggtgaacatatacaaagagctcgctcaggatatc
gacggttttgaaatccctcaacatggattcttgcaaagttgggccgagcaaggtgtatta
ctgcttaataccgtgctgacggttgagcagggcaaagcacattcacattcgaaaacggga
tgggaagcgttcactgataaagtgattgaagcgataaacatgcatcagcagggggttgtg
ttcctgttatggggcgcgcacgcgcagaaaaagggacgatttattgatcgttccaagcat
catgtccttactgctcctcatccttctccgctctctgcccatcgaggctttctggggtgt
aagcacttctctcaagcaaaccaactacttacagcccaaggtaaagagccgataaattgg
catttgccgatgacggtgtaa
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