Vibrio natriegens: PN96_11875
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Entry
PN96_11875 CDS
T04636
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vna
Vibrio natriegens
Pathway
vna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PN96_11875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vna03021
]
PN96_11875
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_11875
Enzymes [BR:
vna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PN96_11875
Transcription machinery [BR:
vna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PN96_11875
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PN96_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALR16630
UniProt:
A0AAN0Y0G3
LinkDB
All DBs
Position
1:complement(2611449..2612441)
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYIPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtctagttgacatcgaacaaatcagc
tcgactcacgcaaaagtaactcttgagccattagagcgtggctttggtcatactctgggt
aatgcacttcgccgcattcttctatcttctatgcctggttgtgcagtgacagaagtagag
attgagggcgtacttcacgaatacagcactaaagaaggcgtacaagaagatattcttgaa
atccttctaaaccttaaaggtttggcagtgcgtgtggctgaaggcaaagatgaagtgttc
attactttgaacaaatcaggctcgggccctgtggttgcaggtgacatcacccatgatggt
gatgtagagatcgctaaccctgaacacgttatttgtcacctaactgatgacaatgctgaa
atcgctatgcgtattaaagtagaacgtggtcgtggttacattccagcttctgcgcgtatc
catactgaagaagacgagcgtccaatcggtcgcctactagtagatgctacttacagccca
gtagacaaaattgcctacgctgtagaagcagctcgtgtagaacagcgtactgatctagac
aagcttgttatcgatatggaaacaaacggtactctagaacctgaggaagcaatccgtcgt
gcagctactatcctagctgaacaattggatgcattcgtagatcttcgtgatgtacgtgtt
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatctagtacaacgtactgaggtagagctacttaaaacgcctaaccttggtaaaaaatct
cttactgagattaaagacgtacttgcgtcacgtggtctgtctctgggcatgcgcctagaa
aactggccacctgcatcaatcgctgaagattaa
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