Vibrio nigripulchritudo: VIBNI_A3604
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Entry
VIBNI_A3604 CDS
T02871
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VIBNI_A3604 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_A3604 (priA)
Enzymes [BR:
vni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VIBNI_A3604 (priA)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VIBNI_A3604 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
AAA_19
Zot
AAA_22
TrwB_AAD_bind
PIF1
T2SSE
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
CCO59577
UniProt:
U4KA58
LinkDB
All DBs
Position
1:3800149..3802350
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AA seq
733 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYLIASHQFPVIGGRVSVPFGRQTLVGVVTELVSQSEFPLHQ
LKTIKEVLDVKPVWSDSLYSLLQWCSQFYLYPLGDTLANAMPAMLRKGRAADFTALKEWF
ITPAGKDRLMTGFGRAVQQAKVMGLLENGPVSHQAMLDNEVSSSVLNTLEDKGWIEQRER
QPKAINWSNEVESDDDKPKLNEEQSVAIAAVNSHQSYGCFLLEGVTGSGKTEVYLNMIKP
VLEKGRQALVLVPEIGLTPQTINRFKRRFQVPVEVIHSGLNDTERLNAWLAARDKHAGIV
IGTRSALLTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRAAKEKIPVVLGSATPA
LETLHNALTGKYHHLTLSNRAGSAVPTTNKVLDVKGLYLESGLSAPLIAEMRKHLNAGNQ
VMLFLNRRGYSPALMCHECGWIADCHRCDAYYTFHQHSREMRCHHCGAQHPVIHQCQGCG
STQLVSVGVGTEQLEEQLATLFPDFKAIRIDRDSTRRKGSLETALKAIRNNEYQILIGTQ
MLAKGHHFPDVTLVGLIDVDNSLYSSDFRASERLAQLFIQVAGRAGRASKAGEVILQTHH
PEHQLLQALIHKGYRHFASTALEERKLALLPPYAFLTLFRAEANQEGAGELFLRQVRQTI
ESHPLFNDECMVLGPMPAPLARRAGKSRWQLMLQAPSRSLMQQLLYSSKPVIDTLPMAKK
VRWTTDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccttctattgccagagtcgccttgcccgtcccattagacaagcaatttgactac
cttatcgcttcccaccagttcccggttattggcgggcgcgttagcgtaccttttggcagg
cagactctggtaggcgtcgtgaccgagcttgtttctcagtctgagtttcctctacatcag
ctcaaaaccattaaagaagtgcttgatgtcaagcctgtgtggtcagactctttatattct
cttcttcagtggtgcagccagttttacctttatccactgggtgacacgctagctaacgcc
atgcctgcgatgttgcgaaaagggcgtgccgccgactttactgcattgaaagaatggttc
atcactcctgcaggtaaagaccgcttgatgactggttttgggcgcgcggttcagcaagcc
aaggtaatgggattactggaaaatggaccggtttcccatcaggcgatgctggataatgaa
gtctccagctccgttttgaataccttagaggacaaaggctggatagagcagcgagaacgc
cagcccaaagccattaactggtcaaacgaagtagagagtgacgacgacaagcccaagttg
aatgaagaacagtccgtcgcgattgctgcggtaaacagccatcaaagttatggctgcttc
ttacttgaaggggtgacaggttcaggcaaaaccgaggtttacctcaatatgatcaagcct
gttctggagaaaggcaggcaggcattggtactggttcctgaaatagggttaacaccacaa
accatcaatcgcttcaaacggcgctttcaggttccggttgaagtcatccactccgggctg
aacgataccgagcgccttaacgcctggttggcagcacgggataagcacgcaggcatcgta
attggcactcgcagtgcgctcctgacgccgtttgctgacctgggcatcatcatcgtcgat
gaagaacacgatgcctcctacaagcaacaagacagccttcgttatcacgcgcgggacgtg
gcagtgatgcgcgcagccaaagaaaagattcctgtggttttgggtagcgcaacacccgca
ctcgaaacgctgcacaatgccctgacgggcaaatatcatcacttaacgctttcaaaccga
gcggggtctgccgtacccaccaccaataaagtattggatgtaaaagggctgtatctcgaa
agcgggctatctgctcctttgatagcggaaatgcgtaaacacctcaatgcgggcaatcag
gtgatgttgtttcttaaccgacgcggttactcccctgctctgatgtgtcatgaatgtgga
tggatagcggattgccatcgctgcgatgcttattacacctttcatcagcacagccgtgaa
atgcgttgtcaccactgtggggcacaacatcctgtcatacaccaatgccagggctgcggt
tcaactcaactggtttccgtaggagtgggcacagagcagttggaagaacaattagccact
ttattccccgattttaaagccattcgaatagaccgagacagcactcgccgaaaaggcagc
ctggaaaccgcgcttaaggcgattcgtaataacgagtaccagattctaattggcacacaa
atgctggcgaaagggcatcacttcccggacgttacattggtgggtctgatcgatgtggac
aactcactctacagctcagattttcgagcatcggaaagactggctcaactgttcattcaa
gttgccggaagagcagggagagccagtaaagccggagaggttatccttcagactcatcac
ccagagcaccaacttctacaggcgctcattcataaaggctatcgtcatttcgccagcaca
gctttagaagaaaggaagctcgcgctgctgccgccttacgctttcttgaccttatttcgc
gccgaagcgaatcaggaaggagctggagaattattcctgcgtcaggtcaggcaaactatt
gaatcacatccgcttttcaatgatgaatgtatggtattgggaccaatgcctgcacctctg
gcacgccgtgcgggaaaatcacgatggcaactaatgttgcaagccccatcacgttcttta
atgcaacaattactgtacagttcaaaaccagtcatcgacacattgccgatggcgaaaaaa
gtgcgctggaccactgacatcgaaccgcaagatctctcctga
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