Veillonella nakazawae: VEIT17_08620
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Entry
VEIT17_08620 CDS
T06972
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
vnk
Veillonella nakazawae
Pathway
vnk03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VEIT17_08620 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnk03032
]
VEIT17_08620 (rnhB)
Enzymes [BR:
vnk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
VEIT17_08620 (rnhB)
DNA replication proteins [BR:
vnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
VEIT17_08620 (rnhB)
Elongation factors (archaeal)
VEIT17_08620 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Ecm29
Toprim_2
DUF4059
Motif
Other DBs
NCBI-ProteinID:
BBU34416
LinkDB
All DBs
Position
978391..979188
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AA seq
265 aa
AA seq
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MDKDTFSKLKVADIKALFETEQALDILSLAQEDTRSSVQKLAASYIKRQEKELKEQQRLM
SMYDYEGMFYDQGMYHVAGVDEVGRGPIAGPVTVAAVILPPMTLIPGLNDSKKLTEEKRE
ALYDIIMDEAIAVSCISYGPEKIDELNIYEATRQAMYEAIRTLSVPAEAVVADAMKLPDL
TIPVESIIKGDSKSANIAAASIIAKVTRDRYMKSLDDEYPGYGFGIHKGYYTELHKEAVE
QQGVTPLHRKSFEPIKSIVRWVKPE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggataaggatacatttagtaaattaaaagtggcagatataaaagctctttttgaaact
gaacaagccttagatattttgtctttagcccaagaggatactcgtagttctgtacaaaaa
ttggctgcttcttacattaagcgccaagaaaaagagttaaaagaacaacaacgcctcatg
agcatgtatgactatgaaggtatgttctacgatcaaggtatgtatcatgtagctggtgtc
gacgaggtaggtcgtggccctattgcaggacctgtaacggtagctgccgttatattgccg
cctatgacattaattcctggtttaaatgactctaaaaagctaactgaagaaaagcgtgaa
gccctctacgatatcatcatggacgaagctatagcagttagctgtatttcttacggccca
gaaaagattgatgagctcaatatctatgaagcaacgcgacaagcgatgtatgaggcgatt
cgcacgctcagcgtaccagctgaagcagtagtagctgatgcaatgaaattgcctgatctg
acgattcctgttgaatctattattaagggcgatagtaaaagcgctaatattgcggctgca
tcaatcattgcaaaggttacacgagatcgatatatgaagagccttgatgatgaataccct
ggttacggatttggtattcataaaggctattatacggagttacataaagaagctgttgaa
caacaaggtgtaacaccactacatcgcaagagctttgaacctattaaatctattgttcgt
tgggttaagccagagtaa
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