Vibrio neptunius: KW548_00535
Help
Entry
KW548_00535 CDS
T08906
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
vnp
Vibrio neptunius
Pathway
vnp02024
Quorum sensing
vnp03018
RNA degradation
vnp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KW548_00535 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KW548_00535 (hfq)
05111 Biofilm formation - Vibrio cholerae
KW548_00535 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnp03019
]
KW548_00535 (hfq)
03036 Chromosome and associated proteins [BR:
vnp03036
]
KW548_00535 (hfq)
Messenger RNA biogenesis [BR:
vnp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KW548_00535 (hfq)
Chromosome and associated proteins [BR:
vnp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
KW548_00535 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QXX06693
LinkDB
All DBs
Position
1:complement(117197..117463)
Genome browser
AA seq
88 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARPVSHHSGERPQGGERQQEKSED
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccattcttaaatgcattacgtcgtgaacgtatt
cccgtatcaatctacctagtaaacggaattaaactacagggtcagattgagtctttcgat
caatttgtgatcttgctgaaaaacaccgtcaaccagatggtatacaagcacgctatctcc
acagtagtgcctgctcgtccagttagccaccatagtggtgagcgtcctcagggcggcgag
cgtcagcaagagaaatcagaagattaa
DBGET
integrated database retrieval system