Vibrio navarrensis: IF132_11045
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Entry
IF132_11045 CDS
T07785
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00020
Citrate cycle (TCA cycle)
vnv00640
Propanoate metabolism
vnv00660
C5-Branched dibasic acid metabolism
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01120
Microbial metabolism in diverse environments
vnv01200
Carbon metabolism
Module
vnv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vnv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IF132_11045 (sucD)
00640 Propanoate metabolism
IF132_11045 (sucD)
00660 C5-Branched dibasic acid metabolism
IF132_11045 (sucD)
Enzymes [BR:
vnv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IF132_11045 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
QOD69344
LinkDB
All DBs
Position
1:complement(951089..951961)
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AA seq
290 aa
AA seq
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MSVLINKDTKVICQGFTGGQGTFHSEQAIAYGTQMVGGVSPGKGGQTHLGLPVFNTVREA
VEATGATATVIYVPAPFCKDAILEAIDAGIQLIVTITEGIPTTDMIDVKVKLEETGVRMI
GPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEDAAAFIKENVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLADIGKALREVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtactaattaacaaagacaccaaagtaatctgtcaaggtttcaccggtggtcaa
ggcacattccactccgagcaagcgatcgcttacggcacacaaatggttggtggtgtttct
ccaggtaaaggtggtcaaactcatcttggcttaccagtgttcaataccgttcgtgaagcg
gtagaagcaacgggcgcgacagcaacggttatctacgttccagcaccattttgtaaagat
gcgattcttgaagcgatcgacgcaggtattcaacttatcgtcacgattaccgaaggcatt
ccgacgaccgacatgatcgacgtgaaagtgaagctggaagaaactggcgtgcgcatgatc
ggtcctaactgtccgggtgtaattacgcctgatgaatgtaagataggcatcatgcccggc
cacatccacaagaagggcaaagtgggtatcgtttctcgctctggtactctgacgtacgaa
gccgtgaaacagaccactgacgaaggcttcggccagtctacctgtgttggtatcggtggt
gacccaatcccaggttcaaacttcatcgatatcctgaaactgttccaagaagacccagaa
actgaagcgatcgtcatgattggcgagatcggtggtacagcagaagaagatgccgctgcg
tttatcaaagaaaatgtgactaagccagtggtgtcttacatcgcaggtgtgaccgcgcct
ccaggcaaacgtatgggccacgcaggcgcaatcatttctggcggtaaagggacagcagac
gagaagtttgctgcactggaatcagctggggtgaagacagttaagagccttgctgacatc
ggtaaagcgttgcgcgaagtaacgggttggtaa
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