Vogesella sp. XCS3: LCH97_07295
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Entry
LCH97_07295 CDS
T07617
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vog
Vogesella sp. XCS3
Pathway
vog03030
DNA replication
vog03430
Mismatch repair
vog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCH97_07295 (dnaQ)
03430 Mismatch repair
LCH97_07295 (dnaQ)
03440 Homologous recombination
LCH97_07295 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vog03032
]
LCH97_07295 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vog03400
]
LCH97_07295 (dnaQ)
Enzymes [BR:
vog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCH97_07295 (dnaQ)
DNA replication proteins [BR:
vog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCH97_07295 (dnaQ)
DNA repair and recombination proteins [BR:
vog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCH97_07295 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF3473
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UDM18456
LinkDB
All DBs
Position
complement(1534089..1534820)
Genome browser
AA seq
243 aa
AA seq
DB search
MRQIILDTETTGLDPNQGHRIIEFAGLEMEGRKLTGRSLHLYIHPERDIDPDAERVHGIS
LASLEGKPRFAEVAQQLVDFIDGAELIIHNAPFDVGFMNAEFKRLGMPPVAKVAGGVIDT
LAMARDNFPGKRNSLDALCDRFEIDRSNRTYHGALIDCELLSEVYLWMTRGQDSLLMDAG
LAENDNSAGGMRMAFERKPLAVLQPSAEELAEHQAYLDLLDKSVKGSCLWRSIENPPPAE
PAA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcattcttgataccgaaaccaccggcctggacccgaaccagggccaccgc
attatcgaatttgccggcctggagatggaaggccgcaagctgaccggccgtagcctgcac
ctgtacattcacccggaacgcgacatcgaccccgacgccgagcgcgtgcacggcatttcg
ctggccagcctggaaggcaagccgcgttttgccgaggtggcacagcagctggtcgatttt
atcgacggtgccgagctcatcattcataacgccccgtttgacgtgggcttcatgaacgcc
gagttcaagcgcctgggcatgccgccggttgccaaggtcgccggtggggtgatcgacacc
ctggccatggcgcgcgataactttcccggcaagcgcaacagcctggacgcactgtgcgac
cgcttcgagatcgaccgcagcaaccgtacctaccacggcgcgctgatcgactgcgagctg
ttgtccgaagtctacctgtggatgacgcgtggccaggacagcctgctgatggacgccggc
ctggccgaaaacgacaacagcgccggcggcatgcgcatggccttcgagcgcaaaccgctg
gccgtgctgcagcctagcgccgaggagctggccgaacaccaggcctacctggacctgctg
gataaaagcgtgaaaggcagctgcctgtggcgcagcatcgaaaacccgcctccggcggag
cctgctgcatga
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