Vogesella sp. XCS3: LCH97_13035
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Entry
LCH97_13035 CDS
T07617
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vog
Vogesella sp. XCS3
Pathway
vog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCH97_13035 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vog03400
]
LCH97_13035 (ung)
Enzymes [BR:
vog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCH97_13035 (ung)
DNA repair and recombination proteins [BR:
vog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCH97_13035 (ung)
Prokaryotic type
LCH97_13035 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UDM16210
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All DBs
Position
2731593..2732306
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AA seq
237 aa
AA seq
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MHYLAPALATLPAAWQAVLQQPAIAANLQQIEAKLAERAAGGAVIYPPAGQIFHALQHVD
PAAVRVVILGQDPYHGAGEAMGLSFSVPAGVKIPPSLRNMYKELASDLGIAPASHGDLTH
WAQQGVLLLNTSLTVEADCAGSHGKFGWQAVTDALIDAVNAHNPGCVFLLWGNWAQGKAE
RIDASRHGVFKAVHPSPLSASRGFFGSRPFSQANAWLQAHGREAIDWALPAPQGGLF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcactacctcgcccccgccctggccaccctgcccgccgcctggcaagccgtgctgcag
cagccggctattgcagccaatttgcagcaaattgaggccaagctcgccgaacgtgccgct
ggcggtgccgtcatctacccgccggccgggcagatattccacgcgctgcagcacgtagac
ccggccgccgtgcgcgtggtgatcctggggcaagatccctaccacggcgccggcgaggcg
atggggctgagcttttcggtaccggccggggtgaagatcccgcccagcctgcgcaatatg
tacaaggagctggccagcgaccttggcatcgcgcctgccagccacggcgacctgacccac
tgggcgcaacagggggtgctgctgctgaacacctcgctgacggtggaagccgactgcgcc
ggcagccacggcaagttcggctggcaggcggtgaccgacgcgctgatcgacgcggtgaac
gcgcacaaccccggctgcgtgtttttgctgtggggtaactgggcgcagggcaaggccgag
cgcatcgacgccagccgccacggcgtgttcaaggccgtgcacccgtcgccactgtcggcc
agccgcggctttttcggctcgcgcccgttctcgcaggccaacgcctggttacaggcgcac
ggccgcgaggcaatcgactgggcgctaccggcgccgcagggcggcttgttctaa
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