Vibrio parahaemolyticus RIMD 2210633: VPA0055
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Entry
VPA0055 CDS
T00120
Name
(GenBank) chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00520
Amino sugar and nucleotide sugar metabolism
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
VPA0055
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
VPA0055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
ChitinaseA_N
PKD_4
CBM_5_12
Sde0182_C
He_PIG
REJ
DUF6414
Motif
Other DBs
NCBI-ProteinID:
BAC61398
UniProt:
Q87K43
LinkDB
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Position
2:complement(45762..48308)
Genome browser
AA seq
848 aa
AA seq
DB search
MIRFNLCAAGVALALSGAAVAAPTAPSVDMYGSNNLQFSKIELAMETTSGYYDMVKYHDQ
AKITVKFNQWSGTPGDTYNIYFDGVKVATGAITGGQTTATFDYGQGGLYQMEIEACDATG
CSKSDPAEITIADTDGSHLKPLTMNVDPNNKTYNTDPSVVMGTYFVEWGIYGRNYTVDNM
PADNLTHILYGFIPICGPNESVKSVGGNSFNALQTACRGVPDYEVVIHDPWAAYQKSFPQ
AGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGWTLSDPFYDFVNKANRDTFVASVKKF
LKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPAYVALMRELRAMLDELEAETGRTYEL
TSAIGVGYDKIEDVNYADAVQYMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDG
SGVDENGEAYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPM
TGTATGKLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRTT
GELITFDDHRSVLAKGSYAKSLGLAGLFSWEIDADNGDILNAMHEGMAGGVVPQPNRKPT
AAAGADQSVTGPASVVLDGSQSKDSDGTIASYAWEQVSGTAVVLAGANTAKASFDAAEVT
VEEQLTFKLTVTDNEGATASDLVVVTVKPAGVVDPVNNAPVAQVVAPATANAGDVVVVDA
SASSDADNDTLTFNWTLPQGLNATVNGSKVTFTAAEYPQDTSLSFTVSVSDGKASSSASA
TVVVAQHTTDPNPGTCDNAWDASAVYTGGNQVTHAGKTWEAKWWTQGDDPSKSGEWGVWK
EVGVANCN
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgattcgatttaacctatgtgcagctggggttgctttagcgctatcaggtgctgcagtc
gcagctccgaccgcaccaagtgtcgatatgtacggttctaataaccttcaattttctaaa
attgaactggctatggaaaccacatctggctactacgacatggtgaaataccatgaccaa
gctaaaatcaccgttaaattcaaccagtggagcggtacacctggcgacacttacaacatc
tattttgatggcgtaaaagtcgcaacaggcgctatcactggcggccaaaccacagcaaca
tttgattacggccaaggcggcttgtaccaaatggaaattgaagcgtgtgatgctacaggc
tgttcgaaaagtgatcctgcagaaatcaccatcgcggatacagatggctctcacttgaag
ccactaacgatgaacgttgatccaaacaacaaaacatacaacaccgaccctagcgtcgtg
atgggtacgtactttgttgaatggggcatctatggtcgtaactacaccgtagacaacatg
ccagccgacaacttaactcacatcctttacggctttattccaatctgtggtccaaacgaa
tctgttaagtctgttggtggtaacagctttaacgctcttcaaactgcatgtcgcggtgtg
cctgattacgaagtggtaatccatgacccatgggccgcttaccagaagagcttcccgcaa
gctggccacgagtacagcacgcctatcaagggtaactacgcaatgctaatggcattgaaa
caacgtaaccctgatctaaaaatcatcccatctatcggtggctggacactgtctgaccca
ttctacgatttcgttaataaagcgaaccgcgacacattcgtggcatcggttaagaaattc
ctgaaaacttggaaattctacgatggtgtagatattgactgggaattccctggtggcggc
ggtgctgcagcagataaaggcgacccagtaaacgatggtccagcttacgttgcattgatg
cgtgaactgcgcgcaatgctagatgagctagaagcagaaactggccgtacttacgagcta
acttcagcaattggtgtcggctacgacaagattgaagacgtaaactacgcagatgccgtt
caatacatggactacatcttcgcgatgacttacgacttctacggcggctggaacaacgtt
cctggtcaccaaactgcactttactgtggttcgttcatgcgccctggtcaatgtgacggc
agcggcgtagatgaaaacggcgaagcttacaaaggccctgcgtatacagcagataacggt
atccaacttcttcttgctcaaggcgttcctgcgaacaagctagtccttggtactgcaatg
tacggccgtggctgggaaggcgtaacaccggatacgctcactgatccaaacgacccaatg
acaggtactgcgacaggtaaactgaaaggcagcactgcacaaggtgtttgggaagatggc
gtaatcgactacaaaggcattaagtcattcatgctaggtgcaaacaacactggcattaac
ggcttcgagtacggctacgatgcacaagctgaagcaccatgggtatggaaccgtacaacg
ggtgagttgatcacatttgatgaccatcgctcagtgctagcaaaaggtagctacgcgaaa
tctctgggtcttgctggtctattctcttgggaaatcgacgcggataacggcgacattctc
aacgcaatgcacgaaggtatggctggcggtgtggttcctcaaccaaaccgtaaaccaaca
gccgcagctggcgcagatcaatcggtaactggcccagcaagtgtggttctagatggtagc
caatcgaaagactctgacggcactatcgcgagttacgcgtgggaacaagtatctggcaca
gcagtggtactagcaggcgcaaacacagcgaaagcaagctttgatgcagcagaagttact
gttgaagagcaattaactttcaagctgacagtgactgacaacgaaggtgcaacggcatct
gaccttgttgtagtaactgtgaagccagcaggtgtggttgacccagtgaacaacgcacca
gtagcgcaagttgttgctccagcaacagcaaacgctggtgacgttgtggttgtagatgca
tctgcgtctagcgatgcagacaacgatactcttactttcaactggactctgcctcaaggt
ctgaacgcaacggtaaacggctctaaagtgacgttcactgctgcggaatacccgcaagac
acaagcctaagtttcactgtaagtgtgagcgacggtaaagcgtcttcatcggcaagcgcg
acagtggttgttgcacagcacacaaccgatccaaacccaggtacttgtgacaacgcatgg
gatgcgagcgcagtgtacacaggtggcaaccaagtgactcacgcaggtaaaacgtgggaa
gcgaaatggtggactcagggtgacgatccaagcaagtctggcgaatggggtgtatggaaa
gaagttggcgtagctaactgtaactaa
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