Vibrio parahaemolyticus RIMD 2210633: VPA0068
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Entry
VPA0068 CDS
T00120
Name
(GenBank) GGDEF family protein
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPA0068
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VPA0068
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Motif
Other DBs
NCBI-ProteinID:
BAC61411
UniProt:
Q87K30
LinkDB
All DBs
Position
2:complement(59137..60228)
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AA seq
363 aa
AA seq
DB search
MKLSEAYPIKQKNYSTTSKMLLLVFATSLLLANVILLQQTRVLAQSFTDEQKQATWFLFQ
LSKELSELVSEARRLDENVLKIEGAELQYELAWSRFDLLINSKDVYTFFSRNHIQQYFLQ
LFNEFKELEPLLVEAKTGDSQAAAQFYRATQTLYLNLVEFVNQNFRLTSQVYETQKDESQ
RLMKAQYMLFATFVLSILSLTYFFYRESHFHRKLALSDPLTGLGNRNALFVTLRNNTRNR
TAFSLCLLDLNGFKNVNDTYGHQAGDTVLCEIAKRLKDMNIDSFSTYRMGGDEFAVVIES
SDVDAEEAKKHIHSVFDTPVLNANNVSSLSTSIGVAHYPSDSDNVDFLISIADKRMYKMK
FQR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcagaagcttacccaattaaacaaaaaaattattcgacgaccagcaaaatg
ctccttttggtttttgccacttctttattgctcgcaaatgtcatattgctccaacaaact
cgggtcttagcgcaaagttttactgatgagcaaaaacaagcgacatggtttttattccag
ttatcgaaagaactttctgagctcgtcagtgaagcacgtcgactggacgaaaatgtttta
aaaatagaaggtgcagaacttcagtatgagcttgcttggagccgttttgatttattaata
aatagtaaagacgtctacacctttttttctcgcaatcacattcaacaatattttttgcaa
ctgtttaatgagtttaaagagttagaaccactgttggtggaagccaaaaccggagacagc
caagcggcagctcagttttatcgcgccactcaaacgctgtatttaaacttggtggagttt
gtgaaccagaactttcgcttaaccagccaagtgtacgagacacaaaaagatgaaagccaa
cgattgatgaaagcgcaatacatgctgtttgccactttcgtcttgtcgattttgtcgctg
acttacttcttctacagagaatcgcacttccatcgtaagctggcgttgagtgaccccctt
actggccttggcaaccgaaatgctctgtttgtcacgttgagaaataacacccgcaaccga
acggctttttctttgtgtctgttggatctaaacgggttcaaaaacgtgaatgacacgtac
ggccaccaagctggtgatacggtgttgtgcgaaattgccaagcgattgaaagacatgaat
attgatagcttcagtacctatcggatgggtggagacgagtttgctgtcgtgattgagtcc
tcagacgtcgatgcagaggaggcgaaaaaacacatccattccgtgtttgatactccggtt
ctgaacgcaaacaacgtatcgtcactgtcgaccagtattggcgtcgcgcactacccaagt
gacagcgataatgttgactttcttatcagcatagcggataagcgcatgtacaaaatgaaa
tttcaacgttaa
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