Vibrio parahaemolyticus RIMD 2210633: VPA0440
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Entry
VPA0440 CDS
T00120
Name
(GenBank) putative ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VPA0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpa03032
]
VPA0440
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
VPA0440
DNA replication proteins [BR:
vpa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
VPA0440
Prokaryotic type
Elongation factors (bacterial)
RNase H
VPA0440
Elongation factors (archaeal)
VPA0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
BAC61783
UniProt:
Q87J15
LinkDB
All DBs
Position
2:429180..429689
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AA seq
169 aa
AA seq
DB search
MNTQLQTTHLLHNAQHPLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCVYEYSSSVRRT
GGVTSQRAELLALIIALLVAGEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQ
DLWMLIDELKAIRPRVSVEHVAGHSGIKGNEHSDRLATQAAVDSKQTLS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaacttcaaacgacacatctattacacaacgctcagcacccactaagtatc
tattgcgatggttcagcaccagacaatcagcacgggtgtcttcaagggggtgttggtatc
gcggtttacgacgctcttggtcaatgcgtctatgagtactcatcctcggttcgcaggact
ggcggtgtcaccagccaaagggctgagcttctggctctcatcattgccttacttgtagca
ggtgagggggacaatgtctttagtgacagtcagtactgtgtgcggggcttcaatgaatgg
cttgatagctggaagcgtaacgcttggcgcaactcaagcaagaagcctgtcgctaatcag
gacttatggatgctgatagatgagcttaaagctattcgtccacgtgttagcgttgagcac
gtagctggtcactctggtatcaaaggtaatgagcattcagaccgcttagcgacccaagca
gccgttgattctaaacaaacactctcatag
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