Vibrio parahaemolyticus BB22OP: VPBB_0693
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Entry
VPBB_0693 CDS
T02409
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00550
Peptidoglycan biosynthesis
vpb01100
Metabolic pathways
vpb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPBB_0693
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPBB_0693
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
VPBB_0693
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VPBB_0693
Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VPBB_0693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
Motif
Other DBs
NCBI-ProteinID:
AGB09201
LinkDB
All DBs
Position
1:complement(754578..756503)
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AA seq
641 aa
AA seq
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MIRRRRSQIRDYQAEARLFASRAIVAFFGIVVLMGLLVANMYNIQVNQFQDYQTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDATIQELQTILEITPEQIER
FHRERKRTRRFKSVPLLTQLNEKQVAVFSVNQYRFPGVEISATLKRYYPYGEVLTHVIGY
VSRINDRDMQRLIREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAIVLDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRDLLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVITPNTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDVIKSIEESVDTFYYQIAYDLGIDRISNWMMMFGFGDYT
GIDIYEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNNGA
VSAPHLLKSTIDNGDNFEEQENSEYVTYPPIQNVPEKYWDIAKEGMRRVNHGTRGTARRS
FYNMSYQTAGKSGTAQVFGLGENEEYNADEIAEHLRDHALFTGFAPFDDPKVIVTLVLEN
AGGGSSNGGPMARKIFDRVVLGPEEIKPEDDKTNAQKEVTR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtagacgccgcagtcaaatccgagattatcaagccgaagcgcgcctgttcgcc
agccgcgctatcgttgcttttttcggcatcgttgttttgatgggcttgctggtcgccaat
atgtacaacattcaggtgaaccagtttcaagattatcaaacccgttcaaatgacaaccgc
atcaaagtggttcctattgcgccaaaccgcggtcttatctacgaccgaaatggtgtcctg
ttagccgaaaaccgtcctgtctttaacttggagctgactccagaaaaaatcaaagacatc
gacgctactatccaagaattgcaaaccattctggaaatcacaccagaacagatcgaacgc
ttccatcgtgagcgtaagcgtacccgtcgattcaaatccgtcccattgctaacccagctg
aacgaaaagcaggtcgcggtcttttccgtcaaccaataccgttttcctggtgttgaaatc
agtgccacactcaaacgttactacccttacggggaagtgttaacgcacgtaatcggctat
gtttctcgtatcaatgaccgcgacatgcagcgtttgattcgagaagaaaaagacgccaac
taccaagcgactcgtgacatcggtaagttgggcatcgaaaaatactacgaagatctgctg
cacggcactgctggctaccaagaagtggaagtcaacagccgaggacgcgtgattcgcacg
ttaaagtacgtaccgccagttccgggcaaagacattgtcttaaacctcgatatcaacttg
cagctttacgttcatcagcttttggatggtcgacgtggcagcgctatcgtgcttgatcct
cgtgacaatggagtgctagctatggtgtctagcccaagttacgacccgaacgcttttgtc
cacggcatttctggtaaagcctatcgcgatttgttgaacgataaaaaccgcccgttggta
aaccgcacaacgctaggtatttatccgccagcttcaacaatcaagccatttatggctgtc
gcagcgttgcaagaaggcgtaatcacgccaaatactactcgcaacgacccaggttattgg
cgcattcctaactcagacactcgtccattccgtgactggttgcgttggggacatggccgc
gtagatgtcattaaatccattgaagagtctgttgatacgttttactaccaaattgcttat
gacttggggatcgaccgaatttcaaactggatgatgatgtttggttttggagactacaca
ggcatcgatatctacgaagaaagtaaggctaatatgccaactcgtgattggaaaatgtct
cgtcacaaaacgccttggtacaaaggtgacactattcctgttggtatcggccaaggctat
tggacggcgacacctatgcaaattgcgaaagcaacatcggtgttagtgaataatggtgcg
gtttccgctcctcacctcctaaagtccaccatcgataatggtgataactttgaggaacaa
gaaaactctgaatacgtaacctacccaccgattcaaaatgtgccagaaaaatactgggat
attgcgaaagaaggtatgcgccgtgtaaaccatggtactcgtggtacggctcgtcgttct
ttctacaatatgagctaccagacagccggtaaatcaggtacagcgcaggtctttggcttg
ggcgagaacgaggagtacaacgcagatgaaatcgcggaacacttgcgtgaccacgccctg
tttacgggctttgctccgtttgacgatccaaaagttatcgttactctcgtgctagaaaac
gcaggcggtggctcaagtaacggtggtccaatggcgagaaaaatctttgaccgagtggta
cttggcccagaagaaatcaaaccagaagatgacaaaaccaacgcgcaaaaagaggttaca
cgctaa
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