Vicugna pacos (alpaca): 102527068
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Entry
102527068 CDS
T08098
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04151
PI3K-Akt signaling pathway
vpc04510
Focal adhesion
vpc04512
ECM-receptor interaction
vpc04820
Cytoskeleton in muscle cells
vpc04974
Protein digestion and absorption
vpc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102527068 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102527068 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102527068 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102527068 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102527068 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102527068 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vpc00535
]
102527068 (COL9A3)
Proteoglycans [BR:
vpc00535
]
Extracellular matrix (ECM) proteoglycans
Others
102527068 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102527068
NCBI-ProteinID:
XP_015099427
LinkDB
All DBs
Position
19
AA seq
674 aa
AA seq
DB search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NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacagtggggtgcagctgtctgatggcatttttctctttcagaaaatggggctt
cgaggccctcccgggccccaagggccacctgggaagccggggaaggacggcattgacgga
gaagttggtcctccgggtctgcccgggccctcgggaccgaaaggggccccaggcaagcct
gggaaaccaggagagtccgggctcccggggcttcccggtgtggacggcctgactgggcag
gatggacctcctggacccaagggcgcccccggagaacggggaagcctgggacccccgggg
ccacctgggctggggggcaaaggcctccctggaccccccggagaggcaggagtgagtggc
ccccccggtggaattggcctccggggtgctccgggaccctctggactcccaggcctccct
ggtcccccgggacctcctggaccccctggtcacccaggggtcctccccgaaggcgctact
gaccttcagtgcccagccgtctgcccaccaggccccccggggcccccaggaatgccaggg
ttcaagggacccactggctacaaaggggagcaaggagaagtcggcaaggatggcgagaag
ggtgaccccgggcctcctgggccccctggcntcccgggcaccgtggggctgcagggtctg
cgggggctgcagggacttccagggccgctgggaccccccggggaccggggtcccattggg
ctccgagggccccccgggatcccaggagcccctgggaaagtgggtgacagaggcgagagg
ggcccagaggggttccgcggccccaagggcgaccttggcagacctggtcttaaaggtgtc
ccaggcatgtctgggccaggcggagagccgggcatgccgggcaaggacggccgggacggc
atgccaggactcgatggcgagaagggagaagctgggcgcaacggtgccccaggagagaag
ggtcccagtgggctgccgggtctccctggacgagcagggtccaagggtgagaaaggagaa
ctgggcagagctggagagctgggtgaagctggcccttcaggagagcccggtgtccctgga
gacgttggcgtgcccggggagcgtggcgaggctggccacaggggctcagcgggggctctg
ggcccacaaggccctccgggggcccctggagtccgaggtttccagggccggaaaggcagc
ataggagacctcggcctgccaggccctcaaggcctgcgaggcgatgtgggtgaccggggc
cctggaggagccacaggccctaagggagaccagggcattgcgggctcggacggtcttcct
ggggagaagggagaaccgggtcccagtggccctgttggacccaaaggagagtctggcagt
cgaggggagccgggccccaaaggcatccaaggtcccaacggcaccagcggcgcagaaggt
gtcccaggccctcccggccccgtgggcttccagggcgttcgaggcgtgcctggcatcacg
gggaaaccgggcgtcccggggaaagcagccagtgagcagcacatccgggagctgtgcgcg
ggcgccgtcagcgagcaaattgcacagctggctgctcacctgaggaagcccttagcaccg
ggctccatcggtcggcctggtcccgctggtccccctggcccccccggcccccctggctcc
attggtcaccctggtgctcgagggccccctggatatcggggtcccaccggagagctggga
gaccccggccccagaggaagcccaggggacagaggagacaaaggctcggctggcgagggc
ctggacgggcccgacggagagcaagggctccgaggaccacaaggcgtgcctggcatcagc
aaggacggccgggacggggcccccggcgagcctggcctccccggcgatcccgggctcccc
ggagctgttggtgctcaggggacccccggcatatgcgacacctctgcctgccaaggagcc
gttatggcagggggcgtggagaaatccggtccccggagttcctga
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