Vicugna pacos (alpaca): 102527214
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Entry
102527214 CDS
T08098
Symbol
COL6A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04151
PI3K-Akt signaling pathway
vpc04510
Focal adhesion
vpc04512
ECM-receptor interaction
vpc04518
Integrin signaling
vpc04820
Cytoskeleton in muscle cells
vpc04974
Protein digestion and absorption
vpc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102527214 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102527214 (COL6A1)
04518 Integrin signaling
102527214 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102527214 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102527214 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102527214 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102527214 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpc04147
]
102527214 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
vpc00536
]
102527214 (COL6A1)
Exosome [BR:
vpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102527214 (COL6A1)
Glycosaminoglycan binding proteins [BR:
vpc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102527214 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
102527214 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
YcaO
FabMG
Motif
Other DBs
NCBI-GeneID:
102527214
NCBI-ProteinID:
XP_031535317
UniProt:
A0A6J3AQ21
LinkDB
All DBs
Position
1
AA seq
1027 aa
AA seq
DB search
MRLLRALLPLLLQASWATAQDDPAAARAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKAFTKRFIDNLNDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAR
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDSGYEGERGKPGLPGEKGEAGEPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGEMGYPGLPGCKGSPGFDGIQGPPGP
KGDAGAFGLKGAKGEPGADGDPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNPGPDGP
PGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPAGPKGYRGD
EGPPGPEGLRGVPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGTNGTK
GYPGLKGDEGEAGDPGEDNNDISPRGAKGAKGYRGPEGPQGPAGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPNIKNAQDLKEAIKQLQWMGGGTFTGEALQYTRSRLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDLFGLAAGSDQLNVISCQGLVSQ
GRPGISLVKENYAELLDDNFLKNITTQICIDKKCPDYTCPITFTSPADITILLDGSASVG
SHNFDTTKRFTKRLAERFLTAGRTDPDQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLA
GAVDAMDFFNDATDVTDALGYVTRFYREASSPSAKKKLLLFSDGNSQGATAAAIEKAVQE
AQRAGIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTV
SRKVALG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctccgagctctgctcccgctgctgctgcaggcctcctgggccaccgcacag
gacgacccggcggccgccagggccatcgccttccaagactgccccgtggacctgttcttc
gtgctggacacgtccgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaagtcaaggccttcaccaagcgcttcatcgacaatctgaatgacaggtactaccgctgt
gaccgcaacctggtgtggaatgcgggcgcgctgcactacagcgatgaggtggagatcatc
cgcgggctcacgcgcatgcccagcggccgcgacgagctcaagagcagcgtggatgcggtc
aagtacttcggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctg
ctggtggggggctcccacctgaaggagaacaagtacctgatcgtggtgactgacgggcac
cccctggagggctacaaggagccgtgtgggggcctggaggacgccgtgaatgaggccagg
cacctgggcatcaaagtcttctccgtggccatcacgcctgaccacctggagccacgcctg
agcatcatcgccacggaccacacgtaccggcgcaacttcacggcggctgactgggggcag
agccgcgacgcagaggaagtcatcagccagaccatcgacaccatcacggacatgattaaa
aataatgtggagcaagtgtgctgctccttcgagtgccagcccgccaggggacctcctgga
ccgcgaggcgactccgggtacgagggagagcgcgggaagccgggtctcccaggagagaaa
ggagaagccggagaacccggaaggcctggggacctcggacccgttggctaccagggcatg
aagggagaaaaggggagccgaggggagaagggctccaggggacccaagggctacaagggc
gagaaggggaagcgcggcatcgatggcgtggatggcatgaagggggagatggggtacccc
ggcctgccaggctgcaagggctcgcccggattcgacggcatccaaggacccccggggccc
aagggcgatgcgggtgcattcggtctgaaaggagcgaagggggagcctggagcagatggg
gacccagggaggccggggagcacaggcccccccggagatgagggtgagcccggagagcct
ggcccgccgggagagaaaggcgaagccggcgacgagggaaacccgggaccagatggcccc
cctggagagaggggcggcccaggggaaaggggaccacgggggaccccaggcacgcggggc
ccgagaggagacccgggcgaagccggaccccaaggtgaccagggtcgagaaggccccgtt
ggcgttccaggagacccgggcgaggctggccccgctggaccgaaagggtaccgaggggac
gaggggcccccagggcccgagggcctcagaggagtccccgggcctgcaggcccccccgga
gacccagggctgatgggcgaaaggggtgaagacggcccccccggaaacggcaccgagggc
ttccccggcttcccgggctatccgggcagcaggggccctcccgggacaaacggcactaaa
ggctaccccggcctcaagggggatgagggagaagctggggaccccggagaggacaacaat
gacatttctcctcgaggtgccaaaggagcgaaggggtaccgaggccccgaaggcccccag
ggacccgcagggcacacaggacctccggggccggatgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgcgggcccatcgacatcctcttcgtgctg
gacagctctgagagcatcggcctgcagaactttgagatcgccaaggacttcatcgtcaag
gttattgaccggctgagccgggacgagctggtcaagtttgagcccgggcagtcccacgca
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgagggaccccaac
atcaagaatgcccaggacctcaaggaagccatcaagcagctgcagtggatgggcgggggc
acgttcacgggcgaggccctgcagtacacccggagccggctgctgccacccacccagaac
aaccggatcgccctggtcatcaccgacggccgctcggacacccagagggacacgaccccc
ctcagtgtgctctgcggccctgacattcaggtggtctccgtgggcatcaaggacctgttt
ggcttggcagctggctctgaccagctgaatgtcatttcctgccaaggcctggtgtcccag
ggacggccgggcatctcgctggtcaaggagaactatgcggagctgctggacgacaacttc
ctgaagaacatcaccacccagatctgcatagacaagaaatgcccagattacacctgccca
atcacgttcacctccccggccgacatcaccatcctgctggatggctcggccagcgtgggc
agccataacttcgataccaccaagcgcttcaccaagcggctggccgagcgcttcctgaca
gcgggccggacggacccggaccaggacgtgcgcgtggcggtggtgcagtacagcggcacc
gggcagcagcggccggagcgcgcggcgctgcagttcctgcagaactacaccgtgctggcc
ggcgccgtggatgccatggacttcttcaatgacgccactgacgtcaccgacgccctcggc
tacgtgacccgcttctaccgtgaggcctcctcccccagcgccaagaagaagctgctgctc
ttctcagacggcaactcgcagggcgccacagcggctgccatcgagaaggccgtgcaggag
gcccagcgggcgggcatcgagatcttcgtggtggtggtgggccgccaggtgaatgagccc
cacatccgcgtcctggtcaccggcaagacggccgagtacgacgtggccttcggcgagcgc
cacctgtttcgcgtgcccagctaccaggccctgctgcggggcgtcttctaccagacggtg
tccaggaaggtggcgctgggctag
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integrated database retrieval system
