KEGG   Vicugna pacos (alpaca): 102527808
Entry
102527808         CDS       T08098                                 
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04141  Protein processing in endoplasmic reticulum
vpc04210  Apoptosis
vpc04217  Necroptosis
vpc04218  Cellular senescence
vpc04382  Cornified envelope formation
vpc05010  Alzheimer disease
vpc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102527808 (CAPN1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102527808 (CAPN1)
   04217 Necroptosis
    102527808 (CAPN1)
   04218 Cellular senescence
    102527808 (CAPN1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102527808 (CAPN1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102527808 (CAPN1)
   05022 Pathways of neurodegeneration - multiple diseases
    102527808 (CAPN1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vpc01002]
    102527808 (CAPN1)
Enzymes [BR:vpc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     102527808 (CAPN1)
Peptidases and inhibitors [BR:vpc01002]
 Cysteine peptidases
  Family C2: calpain family
   102527808 (CAPN1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 102527808
NCBI-ProteinID: XP_006216759
UniProt: A0ABM5DZP3
LinkDB
Position
25
AA seq 715 aa
MAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDFEQLRAHCLQSGALFRDES
FPPVPQSLGYKELGPNSSKTYGVKWKRPTELFSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYSIILK
ALERGSLLGCSIDISSILDMEAITFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGE
VEWTGAWSDGSSEWNSVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
QRFRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDPDDDYGGRESGCSF
LLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSEQFIN
LREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKCAGTQELDDQVQANLLDEQVLS
EEEIDENFKSLFRQLAGEDMEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDR
DGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELI
ITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggctgaggagatcatcactccggtgtactgcaccggggtgtctgcgcaagtgcaaaag
cagcgggccaaggagctgggcctgggccgccatgaaaacgccatcaagtacctgggccag
gattttgagcagctgcgggctcactgcctgcagagtggggcccttttccgtgatgagtct
ttccccccagtgccccagagcctgggctacaaggagctgggcccaaactcctccaaaacc
tatggcgtcaagtggaagcgtcccacggagctgttctcaaacccccagttcatcgtggat
ggagccacccgcacagacatctgccagggagcgctgggggactgttggctgctggctgcc
attgcctcccttaccctcaatgacaccctcctgcaccgagtagttccgcatggccaaagc
ttccagaatggctatgctggcatcttccatttccagctgtggcagtttggggagtgggtg
gacgtggtggtggatgacctgctgcccaccaaggatgggaagctggtgttcgtgcactct
gcccaaggcaacgagttctggagcgccctgctcgagaaggcctatgccaaggtgaatggc
agctatgaggccctgtccgggggcagcacctccgagggctttgaggacttcacaggcggg
gtcactgaatggtatgagctgcgcaaggcgcccagcgacctctacagcatcatcctcaag
gcactggagcgaggctccctgctgggctgctccattgatatctccagcattctggacatg
gaggccatcaccttcaagaagctggtgaagggccatgcctactctgtgactggggccaag
caggtgaactaccagggccaaatggtgaacctgatccggatgcggaacccatggggcgag
gtggagtggacaggagcctggagtgatggctcctcggagtggaacagcgtggacccttat
gaacgggagcagctccgggtcaagatggaggatggggaattctggatgtcattccgagac
ttcatgcgcgagttcacccgcctggagatctgcaacctgacgcctgacgcactcaagagt
caaaggttccgcaactggaacaccaccctgtacgagggcacctggcggcgggggagcacc
gccgggggctgccggaactacccagccaccttctgggtgaacccccagttcaagatccgg
ctggaggagacagatgacccagacgacgactatgggggtcgtgagtcaggctgcagcttc
ctgcttgctctcatgcagaagcaccgtcgccgggagcgccgattcggccgtgacatggag
accatcggctttgctgtctatgaggtccctccggagctggtgggccagccagctgtgcac
ctgaagcgggacttcttcctggccaacgcgtctcgggcccggtcagagcagttcatcaac
ctgagggaggtcagcacccgcttccgcctgccacccggggagtacgtggtggtgccctcc
acctttgagcccaacaaggagggtgacttcgtgctgcgtttcttctcagagaagtgcgca
gggacccaagagctggatgaccaggtccaggccaacctcctcgatgagcaagtgctctca
gaagaagagattgatgagaacttcaaatccctcttcagacagctggcaggggaggacatg
gagatcagtgtcaaggagctgcggaccatcctcaacaggatcatcagcaaacacaaagac
ctgcggaccaagggcttcagcctggagtcctgccgcagcatggtcaacctcatggaccgt
gatggcaacgggaaactgggcctggtggagttcaacatcctgtggaaccgcatccggaat
tacctgtccatcttccggaagtttgacttggacaagtcgggcagcatgagtgcctatgag
atgcggatggccatcgagtctgcaggcttcaagctcaacaagaagctgtacgagctcatc
atcacccgctactcggagcccgacctggccgtggacttcgacaacttcgtgtgctgcctg
gtgcggttggagaccatgttccggtttttcaaaactctggacacagatctggatggagtc
gtgacctttgacttatttaagtggttacagctgaccatgtttgcatga

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