KEGG   Vicugna pacos (alpaca): 102529278
Entry
102529278         CDS       T08098                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102529278 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vpc03041]
    102529278 (PRPF38A)
Spliceosome [BR:vpc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102529278 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102529278 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 102529278
NCBI-ProteinID: XP_006200552
UniProt: A0A6I9I322
LinkDB
Position
13
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEDEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacggtaaaggatgcgcatagcatccacggcaccaaccctcaatatctg
gtggagaagatcattcggactcgaatttacgagtccaagtattggaaagaggagtgcttt
ggccttacggctgaacttgttgtcgataaagccatggagttaaggtttgtgggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcagatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgtccgc
atgttgggagcgctttacatgaggttgacaggcactgcaattgattgctacaagtacttg
gagcctctgtacaacgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ctgatgcatgtagatgaatttattgatgaactacttcatagtgagagagtctgtgatatc
attctgccccggctacagaaacgctatgtgctggaggaagctgagcaactggagcctcgg
gtcagtgctctagaagaggacatggatgatgtggaatccagtgaagacgaggaagaagag
gatgagaagttggagagagtgccatcacccgatcatcgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacactgcgctaccggagaagtaggagtcggtctcccaga
aggcggagtcggtctcccaaaagaagaagcccctctcctcgccgagaaaggcatcggagc
aagagtccaaggcgtcatcgcagcaggtcccgagatagacggcacagatctcgctccaag
tctccaggtcatcaccgtagtcacagacataggagccactcaaagtctcctgaaagatct
aagaaaagccacaagaagagccggagagggaatgagtaa

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