Vicugna pacos (alpaca): 102536548
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Entry
102536548 CDS
T08098
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc04714
Thermogenesis
vpc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102536548 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102536548 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102536548 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102536548 (SMARCD2)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102536548 (SMARCD2)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102536548 (SMARCD2)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102536548 (SMARCD2)
PBAF complex
102536548 (SMARCD2)
GBAF(ncBAF) complex
102536548 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102536548
NCBI-ProteinID:
XP_006199370
UniProt:
A0A6J3B5N5
LinkDB
All DBs
Position
16
AA seq
456 aa
AA seq
DB search
MSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFSPSKAEGDGAGTAGTPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKS
LVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDP
RLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPM
KLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIAS
LDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRA
AFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagggagccggatgcccatggctggcttgcaggtgggaccccctgccggctcc
ccatttggcacagctgctccacttcgacctggcatgccacccaccatgatggacccattc
cgaaaacgcctgcttgtgccccaggcccagcccccgatgcctgcccagcgccgggggtta
aagaggaggaagatggcagataaagttctacctcagcgaattcgggagcttgtcccagag
tctcaggcgtacatggatctcttggcttttgagcggaagctggaccagaccattgctcga
aagcggatggagatccaggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcgg
atctatatttccaatacgttcagtcccagcaaggcagaaggtgatggtgcaggaaccgca
gggacccctgggggaaccccagcaggggacaaggtggcttcttgggaactccgagtagag
ggaaaactgcttgatgaccccagcaaacagaagaggaagttttcttcattctttaagagc
ctcgtcattgagctggacaaggaactgtacgggcctgacaaccacctggtggagtggcac
cggatgcccaccacccaggagacagatggcttccaggtgaaacggcctggagacctcaac
gtcaaatgcactctcctgctcatgctggatcatcagcctccccagtacaagttggacccc
cgactggcaaggctgctgggggtgcacacgcagacgagggctgccatcatgcaggccctg
tggctttacatcaaacacaaccagctgcaggatggccacgagcgcgagtacatcaattgc
aaccgttacttccgccagatcttcagttgtggccgactccgtttctctgagattcctatg
aagctggctgggttgctgcagcatccggaccccattgtcatcaaccatgtcattagtgtg
gatcctaatgaccagaagaagacagcctgttatgacattgacgtggaggtggatgacccg
ctcaaggcccagatgagcaatttcctggcctctaccaccaatcagcaggagattgcctcc
cttgatgtcaagatccatgagaccattgagtccatcaaccagctgaagactcagagggat
ttcatgctcagtttcagcactgaccctcaggacttcatccaggaatggctccgttcccag
cgccgagacctcaagatcatcactgatgtgattgggaatcccgaggaggagagacgagct
gctttctaccatcagccgtgggcccaggaagcagtggggagacacatctttgccaaggtg
cagcagcgaaggcaggaactggaacaggtgctgggaatccgcctgacctaa
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