Variovorax paradoxus B4: VAPA_1c02070
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Entry
VAPA_1c02070 CDS
T02835
Symbol
metH
Name
(GenBank) methionine synthase MetH
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00270
Cysteine and methionine metabolism
vpd00450
Selenocompound metabolism
vpd00670
One carbon pool by folate
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01230
Biosynthesis of amino acids
vpd04980
Cobalamin transport and metabolism
vpd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VAPA_1c02070 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VAPA_1c02070 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VAPA_1c02070 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VAPA_1c02070 (metH)
04980 Cobalamin transport and metabolism
VAPA_1c02070 (metH)
Enzymes [BR:
vpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
VAPA_1c02070 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Psu
Motif
Other DBs
NCBI-ProteinID:
AGU47337
UniProt:
T1X350
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All DBs
Position
1:210058..212805
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AA seq
915 aa
AA seq
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MNEVSTPRVPPMKLSGLEPVAIDAGSLFVNIGERTNVTGSKAFARMILNGQFEEALAVAR
QQVENGAQVIDINMDEAMLDSKAAMVRFLNLIASEPDIARVPVMVDSSKWEVIEAGLRCI
QGKGIVNSISMKEGVDKFKHEAKLVRRYGAAAVVMAFDEKGQADTYQRKIEICERAYRIL
VDEVGFPPEDIIFDPNIFAIATGIEEHDNYAVDFINAVRWIKQNLPGAKVSGGVSNVSFS
FRGNDPVREAIHTVFLYHAIQAGMDMGIVNAGMVGVYDDLEPTLRERVEDVVLNRRPDAG
ERLVEVAETAKSGAKDDSKKLEWRGTPEHPVHVNQRLSHAMVHGITDFIVEDTEEAYQQI
LAKGGRPLHVIEGPLMDGMNIVGDLFGQGKMFLPQVVKSARVMKSAVAHLIPYIEEEKRQ
DEAAGRDVRTKGKIIIATVKGDVHDIGKNIVTVVLQCNNFEVVNMGVMVPCHEILAKAKV
EGADIVGLSGLITPSLEEMQYVAGEMQKDDHFRIRKIPLLIGGATTSRVHTAVKIAPHYE
GPVVYVPDASRSVSVAQSLLSDQATAYIDEINADYEKVRTQHANKKQVPMWPLAKARANK
TPVDWSSYTPPVPKFIGRRLFKNFDLTELAKYIDWGPFFQTWDLAGPFPAILKDEIVGTE
AVRVYADGQRMLKRLIEGRWLSASGVVGFWPANTVNDDDIELYTDETRSEVALTWYGMRQ
QTEKQVIEGVMRPSRCLADFVAPKDSGLKDYVGVFAVTAGLGVEKKEKYFIDDLDDYSAI
MLKALADRLAEAFAESLHHRVRTDLWGYAPDEGLSNEDMIAEKYRGIRPAPGYPACPDHS
VKRPMFDLLGCADIGMTLTESLAMMPAASVSGFYLSHPESTYFNVGKIGHDQLQDQAARR
KESESDLERLLAPNL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtttccacgccccgcgtccccccgatgaagctgtccggcctcgagccggtg
gccatcgatgccgggtcgctgttcgtcaacatcggcgagcgcaccaacgtcaccggctcc
aaggccttcgcgcggatgatcctgaacggccagttcgaagaggccctggccgtggcgcgc
cagcaggtggagaacggcgcgcaggtgatcgacatcaacatggacgaggccatgctcgac
agcaaggccgcgatggtgcgcttcctgaacctgatcgccagcgagcccgacatcgcgcgc
gtgccggtgatggtcgacagctccaagtgggaagtgatcgaggcgggcctgcgctgcatc
cagggcaagggcatcgtcaactccatctccatgaaggagggcgtcgacaagttcaagcac
gaggccaagctcgtgaggcgctacggcgccgccgcggtggtgatggccttcgacgagaag
ggccaggccgacacctaccagcgcaagatcgagatctgcgagcgcgcctaccgcatcctg
gtggacgaggtgggctttccgcccgaagacatcatcttcgaccccaacatcttcgccatt
gccaccggcatcgaggagcacgacaactacgcggtcgacttcatcaacgccgtgcgctgg
atcaagcagaacctgccgggcgccaaggtgtcgggcggcgtgagcaacgtgagcttcagc
ttccgcggcaacgacccggtgcgcgaagccatccataccgtgttcctgtaccacgcgatc
caggcgggcatggacatgggcatcgtcaatgccggcatggtgggcgtgtacgacgacctg
gagccgaccctgcgcgagcgcgtggaagacgtggtgctgaaccggcggcccgatgcaggg
gagcgcctcgtcgaggtggccgagaccgccaagagcggcgccaaggacgacagcaagaag
ctcgaatggcgcggcacgccggagcatccggtgcacgtcaaccagcgcctctcgcacgcc
atggtgcacggcatcaccgacttcatcgtcgaagacaccgaggaggcctaccagcagatc
ctcgccaagggcggccgcccgctgcacgtgatcgaagggccgctgatggacggcatgaac
atcgtgggcgacctgttcggccagggcaagatgttcctgccgcaggtggtgaagtcggcg
cgcgtgatgaagtcggccgtggcccacctcatcccctacatcgaggaagaaaagcgccag
gacgaggccgcgggccgcgacgtgcgcaccaagggcaagatcatcatcgccaccgtcaag
ggcgacgtgcacgacatcggcaagaacatcgtcaccgtcgtgctccagtgcaacaacttc
gaggtggtgaacatgggcgtgatggtcccgtgccacgaaatcctggccaaggcgaaggtc
gagggcgcggacatcgtgggcctctctggcctcatcacgcccagcctggaagaaatgcag
tacgtggccggcgagatgcagaaggacgaccacttccgcatcaggaagattccgctcctg
atcggcggcgccaccaccagccgcgtgcacaccgcagtcaagatcgcgccgcactacgaa
ggcccggtggtctacgtgcccgatgcctcgcgcagcgtgagcgtggcacagtcgctgctg
agcgaccaggccaccgcgtacatcgacgagatcaacgccgactacgagaaggtgcgcacg
cagcacgccaacaagaagcaggtgccgatgtggccgctggccaaggcgcgcgccaacaag
acgccggtcgactggtccagctacacgccgcccgtgcccaagttcatcggccggcgcctg
ttcaagaacttcgacctgaccgagctcgcgaagtacatcgactggggcccgttcttccag
acctgggacctcgcgggtccgttcccggccatcctgaaggacgagatcgtcggcaccgag
gccgtgcgcgtgtatgccgacggccagcgcatgctcaagcgcctgatcgagggccgctgg
ctcagcgcgagcggcgtggtcggcttctggcccgcgaacacggtgaacgacgacgacatc
gagctctacaccgacgagacgcgcagcgaagtcgcgctcacctggtacggcatgcgccag
cagaccgagaagcaggtgatcgagggcgtgatgcgcccgagccgctgcctggccgacttc
gtcgcgccgaaggacagcgggctgaaagactacgtgggcgtgttcgcggtgacggcgggc
ctgggtgtcgagaagaaggagaagtacttcatcgacgacctcgacgactactccgccatc
atgctcaaggcgctggccgaccggctggccgaggcctttgccgaatcgctgcaccaccgc
gtgcgcaccgacctctggggctatgcgcccgacgagggcctgagcaacgaggacatgatc
gcggagaaataccgcggcatccgccccgcgccgggctaccccgcctgccccgaccacagc
gtgaagcgcccgatgttcgaccttctggggtgcgcggacattggcatgacgctgaccgaa
agcctcgctatgatgcccgccgccagcgtgagcggcttctacctgagccatcccgagtcg
acgtacttcaacgtcggcaagatcgggcacgatcaattgcaggaccaggcggcgcggcgc
aaggagagcgaatccgacctcgagcgcctgctggcgccgaacctttga
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