KEGG   Variovorax paradoxus B4: VAPA_1c02470
Entry
VAPA_1c02470      CDS       T02835                                 
Name
(GenBank) type IV/VI secretion system protein, DotU family
  KO
K11892  type VI secretion system protein ImpK
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c02470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c02470
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c02470
SSDB
Motif
Pfam: DotU OmpA INV_N
Other DBs
NCBI-ProteinID: AGU47377
UniProt: T1X386
LinkDB
Position
1:259801..261177
AA seq 458 aa
MNGVNDMAVGPGGFVPPNPGGGGNNSGNGDPAGVPLASRGAGQQQPQSFTAWHDARRPHA
GDTALAGNNPLVAAANPLLDLIPQIRATGHHDAPAQLREHLVDEVRRFETRAQQSGIAPE
VIIGARYCLCTAVDEAAALTPWGGSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQH
LQLIELIYFCLAMGFEGRFRVIDNGRTQLETLKQRLLQIIRQARGEIAAPLSPHWQDASA
PVRRTRNWVPLWAVGAVAAVLLVLVFGVLTFSLASRSDGAFAAVNAVRLPQTQRAVAVAP
APQPRLQRFLEPEIRDGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYAPVLARVADAL
NSVEGNVLISGFSDNQPIRSVRFPSNWQLSQARADAVKKMIATRVTRPERLRAEGRGDAD
PLVPNDSPANRARNRRVEVTLLVAPVAGAAAPLQGGTR
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaacggtgtcaacgacatggccgtcggtccgggaggcttcgtgccgcccaacccgggc
ggcggcggcaacaacagcggcaacggcgatcccgcgggcgtgcccctggcatcgcgcggc
gccgggcagcagcaaccccagtcattcaccgcatggcatgacgcacgccgtccgcatgcg
ggcgacacggcgctggccggcaacaatccgcttgtcgcggcggccaacccgctgctcgac
ctgatcccgcagatccgcgccaccggccaccacgatgcgcccgcgcagttgcgcgagcac
ctggtcgacgaggtcaggcgcttcgaaacgcgcgcgcaacaaagcggcattgcgcccgag
gtgatcatcggcgcgcgctactgcctgtgcaccgcggtcgacgaggcggccgcgctcacg
ccgtggggcggcagcatctggtcgtcgcagagcctgctcgtgatgttccacaacgagacc
tggggcggcgagaaattcttccagctgctgtcgcggctggtgcagaacccgcagcagcat
ctgcagctgatcgagctcatctacttctgcctggccatgggcttcgaagggcgcttccgc
gtcatcgacaacggccgcacgcagctggagacgctcaagcagcggctgctgcagatcatt
cgccaggcgcgcggcgaaattgccgcgccgctgtcgccgcactggcaggatgcgagcgcg
ccggtgcgccgcacgcgcaactgggtgccgctgtgggccgtgggcgcggtggcggcggtg
ctgctggtgctcgtgttcggcgtgctcaccttcagcctggccagccgttccgacggcgca
ttcgccgcggtcaatgcggtgcgcctgccgcagacgcagcgcgccgtggccgttgcgccg
gcaccgcagccgcggctgcagcgattcctcgaacccgagatccgcgacggcctgctgacc
gtgcgcgacgaggccgaccgcagcgtggtggtgctgcgcggcgacggcctgttcgcatcg
ggctccgaccgcgtgctcgaccgctatgcgcccgtgctcgcgcgcgtggccgacgcgctc
aattcggtggaaggcaacgtgctcatcagcggcttcagcgacaaccagccgattcgcagc
gtgcgcttcccgtccaactggcagctctcgcaggcgcgtgccgatgcggtcaagaagatg
atcgccacgcgcgtcacccgccccgagcgcctgcgcgccgaaggccgcggcgatgccgat
cccctggtgcccaatgattcgccggccaaccgtgcgcgcaaccggcgggtcgaagtgacg
ctgctggtggcgcccgtggccggcgccgcagcgccgttgcagggaggaacccgctga

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