Variovorax paradoxus B4: VAPA_1c05530
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Entry
VAPA_1c05530 CDS
T02835
Name
(GenBank) putative RNA methylase
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpd03009
]
VAPA_1c05530
Enzymes [BR:
vpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
VAPA_1c05530
Ribosome biogenesis [BR:
vpd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VAPA_1c05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
RlmL_1st
MTS
Methyltransf_25
Methyltransf_31
N6_Mtase
Methyltransf_3
AviRa
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AGU47683
UniProt:
T1X524
LinkDB
All DBs
Position
1:600551..601789
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AA seq
412 aa
AA seq
DB search
MNDLSLFLPCAAGVEELLAQEVHALTGRVGQDLLTLRGGVRVRAEWRDALKLNLHSRLAQ
RVLVELAHAPYRSENDLYAIASGVAWEIWFTPKQTFKIETTAQHSPLQSLNFATLRIKDA
IADRFRAKANGVRPSIETQWPDCRVFAHLTTEHCTLYIDTSGEPLFKRGWRQDKGDAPLK
ETLAAAMLAASGWWNPETGAVAAEPLYDPCCGSGTIAIEAAQIARGIPAGSLRRFGFEKL
LPFQAHVWDAIKKEAASLAAPRDVAIFGSDVSHRMVDFAERNAERAGVADAIEFRGGDAL
QRMPPAEGGVIMLNPPYGERIEVGGVARFGAREAAQTSGEGASESGDGGEFFPQLATHWK
KNYAGWTAWVLTPDLKLPRQMRLKESRRVPMWNGPIECRLFRFDMVAGSARK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatctttccctttttctgccttgcgccgccggcgtcgaggaactcctggcgcag
gaagtccatgcgctcaccggccgcgtcgggcaagacctgctcacgctgcgcggcggcgtg
cgggtgcgcgccgaatggcgcgacgcgctcaagctcaacctgcacagccggctcgcccag
cgcgtgctggtcgagctggcccacgcgccctaccgcagcgagaacgacctctacgccatc
gcgagcggcgtggcctgggaaatctggttcacgcccaagcagaccttcaagatcgagacc
acggcgcagcacagtccgctgcagagcctgaacttcgccaccttgcgcatcaaggacgcc
attgccgaccgcttccgcgccaaggccaacggcgtgcgcccgagcatcgagacccagtgg
cccgactgccgcgtgttcgcccacctgaccaccgaacactgcacgctctacatcgacacc
tccggcgaaccgctcttcaagcgcggctggcggcaggacaagggcgacgcgccgctgaag
gaaaccctggccgccgccatgctggccgccagcggctggtggaaccccgaaaccggcgcc
gtggccgccgagccgctgtacgacccctgctgcggcagcggcaccatcgccatcgaggcg
gcgcagatcgcgcgcggcattccggccgggtcgctgcggcgcttcggcttcgagaagctg
ctgccgttccaggcgcacgtctgggacgccatcaagaaggaagccgcatcgttggcggcg
ccacgcgatgtcgccatcttcggctccgacgtctcgcaccgcatggtcgactttgccgag
cgcaatgcggagcgcgccggtgtcgccgatgccatcgagttccgcggcggcgacgcgctg
cagcgcatgccgccggccgagggcggggtgatcatgctcaacccgccctatggcgaacgc
atcgaggtcggcggcgtggcgcgcttcggcgcccgcgaggccgcgcagacttcgggcgag
ggcgccagcgaaagcggcgacggcggcgagttctttccgcagctcgccacccactggaag
aagaactacgccggctggaccgcctgggtgctcacgcccgacctgaagctgcccaggcag
atgcggctcaaggagtctcgccgcgtgccgatgtggaacgggcccatcgagtgccggctg
ttccgcttcgacatggttgcgggttcggccaggaagtag
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