Variovorax paradoxus B4: VAPA_1c06800
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Entry
VAPA_1c06800 CDS
T02835
Name
(GenBank) multidrug resistance protein, AcrB/AcrD/AcrF family
KO
K18138
multidrug efflux pump
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd01501
beta-Lactam resistance
vpd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAPA_1c06800
01503 Cationic antimicrobial peptide (CAMP) resistance
VAPA_1c06800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c06800
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_1c06800
Transporters [BR:
vpd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VAPA_1c06800
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VAPA_1c06800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
DUF6391
Motif
Other DBs
NCBI-ProteinID:
AGU47810
UniProt:
T1X6L6
LinkDB
All DBs
Position
1:complement(743454..746498)
Genome browser
AA seq
1014 aa
AA seq
DB search
MNFATWSLRNPIPAILLFALLTFAGVRGFQQLPIQALPDLDLPTVNIVLSQPGAAPAQLE
TEVARTVENSLATITGLKHTRTSITDGSVQIRVEFSLEKKLSDALIDTKDAVDRVRSNLP
TDLLQPTISAVTERGSPILTYAIASDRMNEEALSWFVDDAVGKALLAVPGVGRVDRLGGV
QREVRVEVNTAQMNALGVTTTDVSRALRRTQQESSGGRGQIGLSEQSVRTVATVRQAAEL
VDMPVTLADGREVRLDQVASVHDTNAERNQAALLDGKAVVGFSVYRAKGFDETRIAQGVT
EALERMQAADTSLVVTPVSGSVEYTREQFRGSMQMLYEGAILAVLVVWWFLRDWRATLVA
ASALPLSILPAFAAMSWLGYSLNTLTLLALAVIVGILVDDAIVEIENIERHRRMGKSVLQ
ATGDAVNEIALAVIATTMTLVVVFVPTTLMSGIPGLFFQQFGWTAVIAVLASLLVARLLT
PILASWLLKPHAPSGKPEADGKLMRVYLDSVRWCLTHRWTTMAAATAFFLISIALIPLIP
SGLIPASDRGFTTVNVELPPGSSLSDTVEVSERVRGALHDVPGIRSVFTAVGAAQIGGAG
QASDVRKSALTLVLRAREDRPSQMAIEKSVRRILTTLPGARFAVSGGGAGEQMSLILTSD
NAQALKASAQAFERDLRGVSRLSSIRTTASLERPEIIVRPDLKRAAGRGVSTATIGETIR
IATSGDFDAQLPKLNLDSRQVDIRVRVPDTTRQDIEALASLRVPSRNGLVPLSSVAELAV
ESGPAQIDRYDRRRYVTVSADLGGMPLGEALTAARVLPAAQQMPSSVSLINTGDAEVAAE
LTSGFGLAILTGVLCMFCVLVLLFKDFLQPVTILSAIPLSLGGAFVALLLARSELDVPSM
IGLVMLMGIVTKNSNLLVEHTVVGMRDRGLPPMDALIDACHKRSRPIVMTTVAMIAGMLP
IALGLGPDASFRQPMAIAVIGGLVTSTLLSLLVVPVVFTYVNGFERWFRSRVAQ
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccacgtggtccttgcgcaacccgattccagccatcctgttgttcgccctg
ctgacatttgcaggtgtgcgcggttttcagcaactcccgatccaggctcttccagacctg
gacctgccgaccgtgaacatcgtgctctctcagcctggcgcggctcccgcccagctcgag
accgaggtcgctcgcacggtagagaattcgctcgccaccatcaccggactcaagcacaca
cgcacgtcgatcaccgacggcagcgtgcaaatccgtgtggagttttcgctggagaagaag
ctttcggacgccctgatcgacacgaaagatgcggtcgatcgcgtgcgttcgaacctgcca
acggatctactgcaaccgaccatcagcgccgtcaccgaacgcggcagcccgatcctcact
tacgccatcgcatccgatcgaatgaacgaggaagcgctctcgtggttcgtcgatgacgct
gtcggaaaagcgctgctcgcggtacccggtgtcggacgcgtggaccggctgggtggcgtc
cagcgcgaagtccgcgtcgaagtgaataccgcacagatgaatgcgcttggcgtgacgaca
acggacgtctcgcgggcattgcggcgcacccagcaggaatcctccggtgggcgcggccag
atcggcctctccgagcaatcggtaagaacggttgcgacggtgcgacaggccgccgaactg
gtggacatgccggtgaccctggccgatggtcgcgaggtgcggctggaccaagtggcatcg
gtgcacgatacgaatgccgaacgcaaccaggccgcactgctggacggcaaggccgtcgtg
ggattcagcgtctatcgcgccaaaggcttcgacgagacgcgaatcgcacagggcgtcacc
gaagcgctagaacgcatgcaggcggccgacacgtctctggtcgtcacgccggtatcgggg
agtgtggaatacacccgcgaacagttccgcggctcgatgcagatgctgtacgagggagcg
atccttgcggtgctggtcgtctggtggttcctgcgtgactggcgtgccacgctggtggca
gcctctgccctgccgctgtcgatcttgccggcgttcgcggcgatgtcctggctcggctat
tcgctcaacacactgacgctgcttgctctggcggtgatcgtcggcatcctggtcgacgat
gccatcgtcgagatcgagaacatcgaacgccaccggcgcatgggtaagtccgtgctgcag
gccaccggcgacgcggtcaatgagatcgcgttggcggtgatcgcaaccacgatgacgctg
gtggtggtttttgtgccaaccacgttgatgagtggcataccgggtctcttctttcagcag
ttcggctggactgcggtgatcgcagtgctggcgtcactgctcgtggcgcgcctgctgaca
cccatcttggcctcatggctgctcaagccgcatgcaccgtcgggaaagccggaggcagac
ggcaagctcatgcgcgtctacctggactcggtgcggtggtgcctgacgcaccgctggaca
acgatggccgcagccaccgcgttcttcctgatctcgatcgcgctgatcccgctgataccc
tcaggcctgattcccgcatcggatcgcggcttcaccacggtcaacgtcgagctaccgccg
ggcagttcgctgagcgacaccgtggaagtgtcggagcgcgtgcgcggcgcgctgcacgac
gtcccgggaattcgcagcgtatttaccgccgtgggagccgcacaaatcggtggtgcgggc
caggcttccgatgtgcgcaagagcgcgctgaccttggtgctgcgagcccgtgaagaccgc
ccctcgcaaatggcgatcgaaaagagtgtgcgcaggatactcaccacgctaccgggtgca
cgctttgccgtgagcggtggcggcgcaggcgaacagatgtcgttgattctcacgagtgac
aacgcgcaggcactgaaagcaagtgcgcaagccttcgagcgcgatttacgcggcgtgagt
cgactctcgagtattcgcacaacagccagccttgagcgccccgaaatcatcgtgcggccc
gacctgaaacgtgccgccgggcgtggagtgagcacggccacgattggcgagaccatccga
attgccaccagtggcgatttcgatgcgcagttgcccaagctcaacctcgacagccgccag
gtcgacatccgtgtgcgcgtgcccgatacgacgcgccaggacatcgaagcgctcgctagc
ctgcgagtgccttcgcgcaacggactggtaccgctgtcgagcgtggccgaactggctgtt
gaaagcggcccggcacagatcgaccgttacgacaggcgccgctacgtcaccgtgagcgcc
gacctcggcggcatgccgctgggcgaggcactgacagcagcccgtgtactgccagcggcg
cagcagatgccgtcgagcgtttcgctgatcaatacgggcgatgccgaagtggcggccgag
ctgacctcgggcttcggcctcgcgatcctcactggcgtgctgtgcatgttctgtgtgctg
gtgcttcttttcaaagacttcctgcagcccgtcaccatcctttcggcgattccgctgtcg
ctgggcggagccttcgtggcgctgcttctggcgcgaagtgagctggatgttccgtcgatg
atcggattggtgatgctcatgggcattgtcaccaagaactcgaacttgctggtggaacac
acagtcgtcggcatgagggaccgcggccttcctcccatggacgcgttgatcgatgcctgc
cataagcgttcgaggccgatcgtgatgaccacggtagcgatgatcgcaggcatgctgccc
atcgccctcggtttgggcccggacgcgagctttcgtcagccgatggcgatcgctgtgatc
ggtggtctcgtgacctcgacactgctcagcctgctcgtggtccctgtggtattcacgtat
gtcaacggattcgagcgctggttcaggtcgcgtgtcgcgcaatag
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