Variovorax paradoxus B4: VAPA_1c21570
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Entry
VAPA_1c21570 CDS
T02835
Symbol
hom2
Name
(GenBank) homoserine dehydrogenase Hom
KO
K00003
homoserine dehydrogenase [EC:
1.1.1.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00260
Glycine, serine and threonine metabolism
vpd00270
Cysteine and methionine metabolism
vpd00300
Lysine biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01230
Biosynthesis of amino acids
Module
vpd_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VAPA_1c21570 (hom2)
00270 Cysteine and methionine metabolism
VAPA_1c21570 (hom2)
00300 Lysine biosynthesis
VAPA_1c21570 (hom2)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.3 homoserine dehydrogenase
VAPA_1c21570 (hom2)
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Motif
Pfam:
Homoserine_dh
NAD_binding_3
GFO_IDH_MocA
Sacchrp_dh_NADP
DUF7697
Motif
Other DBs
NCBI-ProteinID:
AGU49261
UniProt:
T1X9V2
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All DBs
Position
1:2281131..2282489
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AA seq
452 aa
AA seq
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MYRDPVQSLEPLPSRPAAIRALRVGMIGIGTVGSGTFRVLARNQAEIAGRAGRPIELVMV
AARNLVRAAAIVGADVPLTDEPLRVATHPDVDVVVEVAGGTGPAREWVLAAIAHGKHVVT
ANKALLAVHGAEIFAAARRHGVAVAYEGAVAVSIPIVKALREGLAANRIEWVAGIINGTT
NFILSKMRDEGLDFAAALAQAQALGYAEADPAFDIEGIDAAHKLTLLAANAFGTSVRLAD
VQVEGITALQRVDVACAEQLGYRIKLLGVARRREEGVELRVQPALVPASHLMAHVNGSMN
AVMVKGDASGVTMYYGAGAGSEQTASAVIADLVDVARLDGTHAAQRVPHLGFHLHAMSEL
PVLPRAAACCAHYLRIPVHAASHVEAVSGWLAGQQVPVQQVALAAAQPGMGAQVLVLTQP
VRQGAMDLALHALQAHPSVAGKVAALCVEALA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgatccagtccagtccctcgaacccctgcccagccgccccgcggccattcgc
gcgctgcgcgtgggcatgatcggcatcggcaccgtcggctccggcacattccgggtgctg
gcgcgcaaccaggccgagatcgcggggcgggcgggccgccccatcgagctggtgatggtg
gccgcgcgcaacctggtgcgcgccgccgccatcgtgggtgcggatgttcccttgacggac
gaaccgctgcgcgtggccacccaccccgacgtcgacgtggtggtcgaagtggccggcggc
accggaccggcgcgcgaatgggtgctggccgccatcgcgcacggcaagcatgtggtcacg
gccaacaaggccctgctcgcggtgcatggcgccgagatctttgccgcggcccggcggcat
ggggtggccgtggcctacgaaggcgcggtggcggtgagcattcccatcgtcaaggcgctg
cgcgaaggccttgcggccaaccgcatcgaatgggtggcgggcatcatcaacggcaccacc
aacttcatcctgagcaagatgcgcgatgaaggcctggacttcgcggccgcgctcgcgcag
gcccaggcgctcggctatgcggaagccgatccggccttcgacatcgagggcatcgacgcc
gcgcacaagctcacgctgctggccgccaatgccttcggcacctccgtgcggcttgccgat
gtgcaggtggaaggcatcacggccttgcagcgggtggacgtggcctgcgccgagcagctg
ggctaccgcatcaagctgctgggcgtggcgcggcgccgggaagagggcgtggagctgcgc
gtgcagcccgcgctggtgcctgcgtcgcacctgatggcgcatgtgaacgggtcgatgaat
gccgtcatggtcaagggcgatgcgtccggcgtgacgatgtactacggcgcaggcgccggc
tccgaacagaccgcatcggcggtgattgccgacctggtcgacgtggcgcggctcgacggc
acccacgccgcgcagcgcgtgccgcacctcggcttccatctgcacgccatgagcgaactc
ccggtgctgccccgcgccgccgcgtgctgcgcgcactacctgcgcatacccgtgcatgcc
gcgagtcacgtcgaggcggtgtcgggctggctggccgggcagcaggtgccggtgcagcag
gtggcgctggcggctgcgcagcccggcatgggcgcgcaggtgctggtgctgacgcagccg
gtgcggcagggcgcgatggacctggcgctgcatgcgctgcaggcgcatccctcggtcgca
ggcaaagtggcggcgctgtgcgtggaggcgctggcctga
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