Variovorax paradoxus B4: VAPA_1c24460
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Entry
VAPA_1c24460 CDS
T02835
Symbol
ppk1
Name
(GenBank) polyphosphate kinase Ppk
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00190
Oxidative phosphorylation
vpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
VAPA_1c24460 (ppk1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAPA_1c24460 (ppk1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpd03019
]
VAPA_1c24460 (ppk1)
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
VAPA_1c24460 (ppk1)
Messenger RNA biogenesis [BR:
vpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VAPA_1c24460 (ppk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
PurS
Motif
Other DBs
NCBI-ProteinID:
AGU49546
UniProt:
T1XAN4
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All DBs
Position
1:2599476..2601608
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AA seq
710 aa
AA seq
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MQPAPADRALAAAAPALLDRDHSILSFNERVLDWARRPEVPLIERLRYLCIVSSNLDEFF
EVRAAPHLIASSAGEQKGSYTIESFERLAEAAHTLVARQYALYNDELMPTFAKHGIHIIS
HGERNPAQRKWVSEYFEREVRPLLIPVGLDPAHPFPQVANKSLNFIVRLGGKDAFGRENP
IQIVKVPRVLPRVIRMPAKVSDGKTLFVALSSVVRAHLPGMFPGREVGDFSQFRVTRHSD
LAVDEEDVKNLRTALRQGLQHRHYGQAVRLEVSASCAESLASFLLAQFNLPAQALYRVHG
PVNLARLTQLIDLLEEPQLLFPPYAASYPVTLSPAQSFFERLQFGDVLIHQPFESFDGVL
AFLREAVLDPQVLAIKQTIYRTGTDSELMDLLREAVRRGKEVTVVVELKARFDEEANINW
AEMLESIGAQVVYGVVGLKTHAKMLLVTRREGKQMRRYGHLSTGNYNPRTARLYTDISHL
TADPLLTADMEAVFVHLASQSRLPKLNRMWLAPFDLHKNLIAQIDALSLAAATGVPARIV
AKMNALTDEQLVAALMRAGQNGVKIDLIVRGACTLPAQVPGLTDHIRVRSVIGRFLEHSR
VFYFRNGEEESLYLSSADWMNRNMMRRIELAWPVTDPSLRQRLIDECLVAYLHDGRDAWD
LGGDGIYTRVDHDTHSGDAGASPVVESHGAQAALMNRYASRGHHPDASSN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgcccccgctgaccgggcgcttgcggccgcggcacccgcgctgctcgaccgc
gatcacagcatcctgtctttcaatgagcgcgtgctcgactgggcccgcaggcccgaagtg
ccgctgatcgagcgcctgcggtatctttgcatcgtttcgtcgaacctcgacgagttcttc
gaagtccgtgccgcgccacacctgattgccagcagcgccggcgagcagaagggcagctac
acgatcgaatcgttcgagcggctggccgaggccgcccatacgttggtggcgcgccagtac
gcgctgtacaacgacgagctgatgccgacctttgcaaagcacggcatccacatcatttcg
cacggcgaacgcaatccggcgcagcgcaagtgggtcagcgaatatttcgagcgcgaagtg
cgcccgctgctgattccggtcgggctggacccggcgcacccgtttccgcaggtggccaac
aagtcgctcaacttcatcgtgcggctcggtggcaaggatgccttcgggcgcgagaacccg
atccagatcgtgaaggtgccgcgcgtgctgccgcgcgtgatccgcatgccggccaaggtg
tccgacggcaagacgctgttcgttgcgctttcgagcgtggtgcgggcgcatctgcccggc
atgttccccgggcgggaggtgggcgatttctcgcagttccgcgtcacgcgacattccgat
ctggcggtcgacgaggaagacgtcaagaacttgcgcaccgcattgcgccaggggctgcag
caccggcactacggacaggccgtgcggctcgaggtttcggccagctgcgccgagtcgctc
gcaagcttcctgctggcgcaattcaatctgcccgcgcaggcgctctaccgcgtgcacggc
cccgtcaacctggcccgcctgacccagctgatcgatctgctggaggagccgcagctgctt
tttccgccgtacgctgcctcttatcccgtcacgctgtcgccggcgcagtcgtttttcgag
cggctgcagttcggcgacgtgctgatccaccagcccttcgagagcttcgacggcgtgctc
gcgttcctgcgcgaggccgtgctggacccgcaggtgctggccatcaagcagaccatctac
cgcaccggcaccgattcggagttgatggacctgctgcgcgaagcggtgcgccgcggcaag
gaagtgacggtggttgtggagctcaaggcccgcttcgacgaagaggccaacatcaactgg
gccgaaatgctcgagtcgatcggcgcgcaggtggtgtatggcgtggtgggcctgaagacg
cacgccaagatgctgctggtgacacgccgcgagggcaagcagatgcgccgctacggccat
ctctccaccggcaactacaacccgcgtaccgccaggctctacacggacatcagccacctg
acggccgacccgctgctgacggccgacatggaggcggtgttcgtgcatctggcaagccag
agccggctgcccaagctcaatcgcatgtggctggcgccgttcgacctgcacaagaacctc
atcgcgcagatcgacgcgctgagcctggccgctgccaccggcgtgcccgcgcgcatcgtt
gccaagatgaatgcgctgaccgacgaacagctggtcgccgcgctcatgcgcgcgggccag
aacggcgtgaagatcgacctcatcgtgcgcggcgcatgcacgctgcccgcgcaggtgccg
ggcctgacggaccacatccgcgtgcggtcggtgatcgggcgctttctcgaacactcgcgt
gtcttctactttcgcaatggcgaggaagagtcgctctacctgtcgagcgccgactggatg
aaccgcaacatgatgcggcgcatcgagctggcctggccggtgactgaccccagccttcgc
cagcgcctgatcgacgaatgcctggtcgcctacctgcacgacggccgcgacgcctgggac
ctgggcggcgacggcatctacacgcgcgtcgaccatgacacccactccggcgacgcgggc
gcgtcacccgtcgtcgagtcgcacggcgcgcaggccgcactcatgaaccgatatgcatcg
cgaggccatcaccccgatgcatccagcaactga
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