Variovorax paradoxus B4: VAPA_1c43450
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Entry
VAPA_1c43450 CDS
T02835
Name
(GenBank) putative aerotaxis receptor
KO
K03776
aerotaxis receptor
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02020
Two-component system
vpd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAPA_1c43450
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VAPA_1c43450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c43450
Bacterial motility proteins [BR:
vpd02035
]
Flagellar system
Chemotaxis proteins
MCPs
VAPA_1c43450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_9
PAS
HAMP
PAS_4
PAS_8
Spectrin_SYNE1
zf-C4H2
ATG16
COG6_N
NDC80_loop
WXG100_2
Motif
Other DBs
NCBI-ProteinID:
AGU51421
UniProt:
T1XFX5
LinkDB
All DBs
Position
1:complement(4606739..4608484)
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AA seq
581 aa
AA seq
DB search
MRVNLPVTANEYLLDDDAALVSRTDLKGRITYVNPAFVTASGYAVAQLIGKPHNMIRHPD
MPPEAFADMWDTLKQGLPWTGVIKNRRENGDFYWVLANVTPIRRRGEVEGYMSVRSKPDR
ADVAQAEQLYRRFREGEARGLAIRQGEVVKRGWTSLLASLRRLPIRMRVLGSTTAAALSM
LMLGAAGWLGWAGPEAWAAGTAVCALAWAGFGYFLDRTVFRPMDQAVQVAQAIASGGIAR
FEVRPEDEMRHLLRALNQMSANFSAIVVDVDTNVSNVVSASTQIAAGNQNLSSRTEEQAS
SLEQTAASMEQLTGTVKQNADNARQANQLAVSASEVAMRGGGVVNQVVDTMGSINASSKK
IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGAAAKEIKGL
IDDSVDKVEAGSRQVAEAGRTMDEIVDSVKRVTDIMGEITAASQEQSTGIEQVNQAIAQM
DQVTQQNAALVEEAAAAAQSMQEQAAGLVASVSVFKLDTDNAPRALVQMQARVQPALPPR
RAVPALKAPARPAAARRAAETRSAPRLAAAHAAAPGDWTEF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcaatttacccgtcaccgccaacgaatacctgctcgacgacgacgcagcactg
gtgtcgcgcaccgacctgaaagggcgcatcacctacgtcaacccggccttcgtgaccgcc
agcggctacgccgtggcgcaactcatcggcaagccgcacaacatgatccggcaccccgac
atgccgcccgaggcctttgccgacatgtgggacacgctgaagcaggggctgccctggacc
ggcgtgatcaagaaccggcgcgagaacggggatttctactgggtgctcgcgaacgtgacg
ccaatccgccgcaggggcgaggtcgagggctacatgtcggtgcgcagcaagcccgatcgc
gcggacgtcgcgcaggccgagcagctctatcgcaggttcagggaaggcgaggccaggggc
ctggcgatccggcagggcgaagtcgtcaagcgcggctggacgagccttctggccagcctg
cgccgccttcccatacgcatgcgtgtgctgggctcgaccacggccgcggccctgtcgatg
ctgatgctcggcgcagccggctggctcggctgggccggccccgaggcctgggccgccggc
actgcggtttgcgccctggcctgggccggcttcggctacttcctcgaccgcacggtgttt
cggcccatggaccaggcggtgcaggtggcgcaggccattgcctccggaggcattgcgagg
ttcgaggtccgccccgaggacgagatgcgccatctgctgcgcgcgctgaaccagatgagc
gcgaacttctcggccatcgtggtggacgtggacaccaacgtgtcgaacgtggtgtcggcc
tcgacccagatcgcggcgggcaatcagaacctgtcctcgcgcaccgaggaacaggcgagc
tcgctcgaacagacggccgcctcgatggagcagctcaccggcaccgtgaagcagaacgcg
gacaacgcgcgccaggccaaccagctggcggtctccgcctccgaagtggccatgcgcggc
ggcggcgtggtgaatcaggtggtggacaccatgggctcgatcaatgcctcgtccaagaag
atcgtcgacatcatcggcgtgatcgacggcatcgcgttccagaccaacatcctggcgctc
aatgccgcagtggaagcggcacgcgcaggcgagcagggccggggcttcgcggtggtggcc
tccgaggtgagaaacctcgcacagcgctcgggcgcagcagccaaggaaatcaagggcttg
atcgacgactcggtggacaaggtcgaagccggcagtcggcaggtggccgaggcggggcgc
acgatggacgagatcgtcgacagcgtgaagcgcgtgaccgacatcatgggcgagatcacg
gcagccagccaggagcagagcacgggcatcgagcaggtgaaccaggcgattgcgcagatg
gaccaggtgacgcagcagaacgcggcgctggtggaagaggcggccgccgcggcgcagtcg
atgcaggagcaggccgcgggcctggtcgcgtcggtcagcgtgttcaagctcgacaccgac
aacgcgccccgcgcgctcgttcagatgcaggcccgtgtccagccggcgctgccgccgcgc
agggcggtgcccgcgctgaaggcgcccgcccggccggcagcggcacgccgcgcagccgaa
acccgttccgccccaaggctcgctgcggcccatgccgccgcaccgggcgactggaccgag
ttctaa
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