Variovorax paradoxus B4: VAPA_1c52420
Help
Entry
VAPA_1c52420 CDS
T02835
Symbol
secY
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
vpd03060
Protein export
vpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VAPA_1c52420 (secY)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VAPA_1c52420 (secY)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c52420 (secY)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c52420 (secY)
Secretion system [BR:
vpd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VAPA_1c52420 (secY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
AGU52294
UniProt:
T1XIZ0
LinkDB
All DBs
Position
1:complement(5514957..5516270)
Genome browser
AA seq
437 aa
AA seq
DB search
MATNAATIAKTGKFGDLRRRLVFLLLALVVYRIGAHIPVPGINPDQLAALFQGQQGGILS
LFNMFSGGALSRFTVFALGIMPYISASIIMQLMTYVIPTFEQLKKEGEAGRRKITQYTRY
GALGLALFQSFSIAVALESSAGLVIAPGFGFRLTAMVSLTAGSMFLMWLGEQITERGLGN
GISILIFAGIAAGLPAAIGGLASLVTTGAMNPIIALFIIAVVVLVTYFVVFVERGQRKIL
VNYARRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILLPATVVGWFSTGEGGFGWIK
DIAGALRPGEPIYVLLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFIPGIRPGDQTAR
YIDKILVRLTLAGAVYITFVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYM
MSQQYESLLKKANFKTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaacgcggcaacgatcgcaaagacaggcaagttcggcgacctgcgtcgccgg
ctcgtctttttgctgctcgcgctcgtggtctatcggatcggcgcgcacattcctgtgccg
ggcatcaacccggaccagctggcggcgttgttccagggccagcagggcggcatcctgagc
ctgttcaacatgttctcgggcggggcgctgtcgcgcttcaccgtgttcgcgttggggatc
atgccgtacatctcggcgtcgatcatcatgcagttgatgacctacgtgattccgaccttc
gagcaattgaagaaggaaggcgaggcgggtcgccgcaagatcacgcagtacacgcgctac
ggcgcgctcggcctggccctgttccagtcgttcagcattgcagtggcgctcgagtcgtcg
gccggactggtcatcgcccccggtttcggcttccgcctgaccgccatggtgagcctcacg
gcaggctcgatgttcctcatgtggctcggcgagcagatcaccgaacgcggcctgggcaac
ggcatctcgatcctgatctttgcaggtatcgcggccggcctgcccgcagccatcggcggc
ctggcttcgctggtgacgaccggtgcgatgaacccgatcatcgcgctcttcatcatcgcg
gtcgtggtgctggtcacctacttcgtggtgttcgtcgaacgcggccaacgcaagatcctc
gtgaactatgcgcggcgccaggtcggcaacaaggtctatggcggccagtcgtcgcacctg
cccttgaagctgaacatggccggcgtgattccgccgatcttcgcctcgtcgatcatcctg
ctgcccgcaacggtggtcggctggttcagcaccggcgaaggtggtttcggctggatcaag
gacattgccggcgcgctgcgtccgggcgagccgatctacgtgctgctgtacgctgccgcg
atcgttttcttctgcttcttctacacggcactcgtgttcaacagcaaggaaacggccgac
aacctgaagaagagcggtgcattcattccgggcattcgtccgggtgaccagaccgctcgc
tatatcgacaagattctggttcgcctgacgttggccggcgcggtgtacatcaccttcgtc
tgcctgctgcccgagttcctgatcctgaagtacaacgtgccgttctacttcggtggtacc
tccctgctgatcatcgtggtcgtcacgatggacttcatggcccaggtgcaaaactacatg
atgtcccagcagtacgaatcgctgctgaagaaggccaacttcaagacatcgtag
DBGET
integrated database retrieval system
