Variovorax paradoxus B4: VAPA_1c53600
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Entry
VAPA_1c53600 CDS
T02835
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c53600
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c53600
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AGU52412
UniProt:
T1XHM7
LinkDB
All DBs
Position
1:5637075..5639246
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AA seq
723 aa
AA seq
DB search
MFKQKKCAALVMALFPISFQSLAAEAEPAGSASGAKSLEAVTVTGDWLGTPSETKVLEHP
GARSIIERTQIQESGATSVREALRQVPGVQVQESNGTGGSDISLNVGVRGLTSRLSPRST
ILLDGVPLAYAPYGQPQLSLAPLSLGSLEAVDVVRGAGSVRYGPQNVGGIINFVTRSIPK
QFAGEVGVGVESAGHGGGTKTSPTLFIGGTNENGLGLALLYSGTHGDGFRQSNDHASIDD
LMLKGAYRLSKTDDIAVTLHHFEGKGRMPGGLTTAQFAATPFQSDRPFDEFTGRRTDGSI
KYTHDDGVNKFEMLSYYTDSYRSSYLEQEGTGANAGKRRLTTAPRNYKTYAFEPRYSRLI
DSGSVVQEISVGARYLKEEASEVATRSAYYRPSPGFDAYALAQPAYQSSKGGTTAHAVYI
DDRIDFGNWTVTPGVRYESIRSHNDVFTLSNGRVTGANYPKIDSNEVLPTLSVLYRMTER
WSVFANAGVSFGPQQYAQLAQSTSGLHPEKAKTYEIGTHYKGEAWSGELTLFNINFDKEL
QLARSITGDVGQWTDLGATRHRGLESALRYQLGSLSDSLKGLSVSATYTYTQAIAKAGAF
AGRDLPFYSRQVATLGARYERGPWTFNADVYAQSKQRSPGSPDDGANYVTMEDATGRLGN
IPGYATMNLRAGYDFGPSMSNLKLAVGIKNLFDRRYYNRSVDNNGGKYVGPPRTLYLQAS
VAF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaagcaaaagaaatgcgccgccctggtcatggcgctgttccccatcagtttccag
agcctggcggccgaagccgagccggccggctccgcatccggcgcgaagtcgctggaggcg
gtgaccgtcacgggcgactggctcggcacgcccagcgagaccaaggtgctcgagcacccg
ggcgcgcgcagcatcatcgagcgcacgcagatccaggaaagcggcgccaccagcgtgcgc
gaggcgctgcgccaggttcccggcgtgcaggtgcaggagagcaacggcaccggcggcagc
gacatctcgctcaacgtgggcgtgcgcggcctcacctcgcggctgtcgccgcgctcgacc
atcctgctggacggcgtgccgctggcctatgcgccctacggccagccgcagctgtcgctg
gcgccgttgtcgctcggcagcctggaggcggtcgacgtggtgcgcggcgcgggctccgtg
cgctacggcccgcagaacgtgggcggcatcatcaacttcgtgacgcgctcgattccgaag
cagttcgcgggcgaagtgggcgtgggcgtcgagagcgcgggccacggcggcggcaccaag
acctcgcccaccctgttcatcggcggcaccaacgagaacggcctcggtctggcgctgctc
tattcgggcacgcacggcgacggctttcgccagagcaacgaccacgcgagcatcgacgac
ctgatgctcaagggcgcctaccgcctgtcgaagaccgacgacatcgcggtgacgctgcat
cacttcgagggcaagggccgcatgccgggcgggctgaccaccgcgcagttcgcggccacc
ccgttccagtcggaccgcccgttcgacgaattcaccgggcgccgcaccgacggctcgatc
aagtacacgcacgacgacggcgtgaacaagttcgagatgctgagctactacacggattcc
taccgcagcagctacctcgaacaggaaggcaccggcgccaatgccggcaagcggcgactg
accaccgcgccgcgcaactacaagacctacgccttcgagccgcgctactcgcgcctgatc
gactccggcagcgtggtgcaggaaatcagcgtcggggcgcgctacctcaaggaagaggcc
tccgaggtggcgacgcgcagcgcctactatcggccgagcccgggcttcgacgcctatgcc
ctcgcccagcccgcgtaccaatccagcaagggcggcaccactgcccacgccgtctacatc
gacgaccgcatcgacttcggcaactggacggtcacgcccggcgtgcgctacgaatcgatc
cgctcgcacaacgacgtcttcaccctgtcgaacggacgggtcaccggcgcgaactatccg
aagatcgattccaacgaggtgctgccgacgctgtcggtgctctaccgcatgaccgagcgc
tggtcggtgttcgcgaacgccggcgtgtcgttcgggccgcagcagtacgcgcagctcgcg
cagtccaccagcggcctgcaccccgagaaggccaagacctacgagatcggcacgcactac
aaaggcgaggcctggagcggcgagctgacgctgttcaacatcaacttcgacaaggaactg
cagctggcccgctccatcaccggcgacgtcggccagtggaccgacctgggcgccacgcgg
caccgcggcctggagtcggccctgcgctaccagctcggcagcctgagcgattcgctcaag
ggcctgtcggtgtccgcgacctacacctacacgcaggccatcgccaaggccggggccttt
gccggccgcgacctgcccttctactcgcgccaggtggccacgctcggcgcgcgctacgag
cgcgggccgtggaccttcaatgccgacgtgtacgcgcagtcgaagcagcgctcgccgggc
tcgcccgacgacggcgcgaactacgtcacgatggaagacgcgaccggccggctcggcaac
attccgggctacgccaccatgaacctgcgcgccggctacgacttcggcccctcgatgagc
aacctgaagctggccgtgggcatcaagaacctgttcgaccgccgctactacaaccgctcg
gtcgacaacaacggcggcaagtacgtgggcccgccgcgcacgctgtacctgcaggcctcg
gtggcgttctga
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