KEGG   Variovorax paradoxus B4: VAPA_2c00540
Entry
VAPA_2c00540      CDS       T02835                                 
Symbol
rhmD
Name
(GenBank) L-rhamnonate dehydratase RhmD
  KO
K12661  L-rhamnonate dehydratase [EC:4.2.1.90]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00051  Fructose and mannose metabolism
vpd01100  Metabolic pathways
vpd01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00051 Fructose and mannose metabolism
    VAPA_2c00540 (rhmD)
Enzymes [BR:vpd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.90  L-rhamnonate dehydratase
     VAPA_2c00540 (rhmD)
SSDB
Motif
Pfam: MR_MLE_C MR_MLE_N Phage_P2_GpU
Other DBs
NCBI-ProteinID: AGU52618
UniProt: T1XJ81
LinkDB
Position
2:complement(59648..60832)
AA seq 394 aa
MASQTIKQVRAYTLRGGGADYHDQSDGHWIDDHISTPMSKYPEYRQSRRSFGINVLGTLV
VEVEASDGTVGFAVTTGGEPGAFIVEKHLARFIEGARVTDVEKIWDQMYQSTLYYGRKGI
VLNTLSAVDLALWDLMGKLREEPVHQLLGGAVRNELQFYATGARPDLAKQMGFIGGKLPL
QHGPAEGEEGLRRNLEKLAHMRELVGPDFWLMYDCWMSLDLNYATRLAHAAADFRLKWIE
EALPPDDYWGYAALRKNMPAGMMVSTGEHEATRWGFRLLLEMGCCDIIQPDVNWCGGLTE
LVKISALADAHGALVVPHGSSVYSYHFVITRHNSPFAEFLMMAPKADEVVPMFNPLLLDE
PIPQQGRMSVNQLDKPGFGVRLNPECMLERPYSH
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcttctcagaccatcaaacaggttcgtgcctacaccttgcgtggcggcggggccgac
taccacgaccagtccgacgggcactggatcgacgaccacatctcgacgccgatgagcaag
taccccgaataccgccagagccgccgcagcttcggcatcaacgtgctcggcacgctggtg
gtggaagtcgaggccagcgacggcaccgtgggcttcgcagtcacgaccggcggcgagccg
ggggccttcatcgtggaaaagcacctggcgcgcttcatcgaaggggcccgggtcaccgac
gtcgagaagatctgggaccagatgtaccagtcgaccctctactacggccgcaagggcatc
gtgctgaacacgctctccgcggtggacctggcgctgtgggacctgatgggcaagctgcgc
gaggagccggtgcaccagctgctcggcggcgccgtgcgcaacgaactgcagttctatgcc
accggcgcgcgcccggacctcgcgaagcagatgggtttcatcggcggcaagctgccgctg
cagcacggcccggccgaaggcgaggaaggcctgcggcgcaatctcgagaagctggcccac
atgcgcgagctggtcggccccgacttctggctgatgtacgactgctggatgagcctggac
ctcaactacgccacgcggctggcgcacgccgccgctgatttcaggctcaagtggatcgaa
gaggcgctgccgccggacgactactggggctatgcggcgctgcgcaagaacatgcccgcc
ggcatgatggtctcgaccggcgagcacgaggccacgcgctggggcttccgcctgctcctc
gagatgggatgctgcgacatcatccagcccgacgtgaactggtgcggcggcctgacggaa
ctggtcaagatctctgcgctggccgatgcgcacggcgcgctggtggtgccgcacggctcg
tcggtctacagctatcacttcgtcatcacgcggcacaacagcccgtttgccgagttcctg
atgatggcgcccaaggccgatgaagtggtgccgatgttcaacccgctgctgctggacgaa
ccgattccgcagcaggggcggatgtcggtgaaccagctcgacaagccgggtttcggggtg
cgcctgaaccccgaatgcatgctcgagcggccctacagccactga

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