Variovorax paradoxus B4: VAPA_2c00540
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Entry
VAPA_2c00540 CDS
T02835
Symbol
rhmD
Name
(GenBank) L-rhamnonate dehydratase RhmD
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00051
Fructose and mannose metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
VAPA_2c00540 (rhmD)
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
VAPA_2c00540 (rhmD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
AGU52618
UniProt:
T1XJ81
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Position
2:complement(59648..60832)
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AA seq
394 aa
AA seq
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MASQTIKQVRAYTLRGGGADYHDQSDGHWIDDHISTPMSKYPEYRQSRRSFGINVLGTLV
VEVEASDGTVGFAVTTGGEPGAFIVEKHLARFIEGARVTDVEKIWDQMYQSTLYYGRKGI
VLNTLSAVDLALWDLMGKLREEPVHQLLGGAVRNELQFYATGARPDLAKQMGFIGGKLPL
QHGPAEGEEGLRRNLEKLAHMRELVGPDFWLMYDCWMSLDLNYATRLAHAAADFRLKWIE
EALPPDDYWGYAALRKNMPAGMMVSTGEHEATRWGFRLLLEMGCCDIIQPDVNWCGGLTE
LVKISALADAHGALVVPHGSSVYSYHFVITRHNSPFAEFLMMAPKADEVVPMFNPLLLDE
PIPQQGRMSVNQLDKPGFGVRLNPECMLERPYSH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagaccatcaaacaggttcgtgcctacaccttgcgtggcggcggggccgac
taccacgaccagtccgacgggcactggatcgacgaccacatctcgacgccgatgagcaag
taccccgaataccgccagagccgccgcagcttcggcatcaacgtgctcggcacgctggtg
gtggaagtcgaggccagcgacggcaccgtgggcttcgcagtcacgaccggcggcgagccg
ggggccttcatcgtggaaaagcacctggcgcgcttcatcgaaggggcccgggtcaccgac
gtcgagaagatctgggaccagatgtaccagtcgaccctctactacggccgcaagggcatc
gtgctgaacacgctctccgcggtggacctggcgctgtgggacctgatgggcaagctgcgc
gaggagccggtgcaccagctgctcggcggcgccgtgcgcaacgaactgcagttctatgcc
accggcgcgcgcccggacctcgcgaagcagatgggtttcatcggcggcaagctgccgctg
cagcacggcccggccgaaggcgaggaaggcctgcggcgcaatctcgagaagctggcccac
atgcgcgagctggtcggccccgacttctggctgatgtacgactgctggatgagcctggac
ctcaactacgccacgcggctggcgcacgccgccgctgatttcaggctcaagtggatcgaa
gaggcgctgccgccggacgactactggggctatgcggcgctgcgcaagaacatgcccgcc
ggcatgatggtctcgaccggcgagcacgaggccacgcgctggggcttccgcctgctcctc
gagatgggatgctgcgacatcatccagcccgacgtgaactggtgcggcggcctgacggaa
ctggtcaagatctctgcgctggccgatgcgcacggcgcgctggtggtgccgcacggctcg
tcggtctacagctatcacttcgtcatcacgcggcacaacagcccgtttgccgagttcctg
atgatggcgcccaaggccgatgaagtggtgccgatgttcaacccgctgctgctggacgaa
ccgattccgcagcaggggcggatgtcggtgaaccagctcgacaagccgggtttcggggtg
cgcctgaaccccgaatgcatgctcgagcggccctacagccactga
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