Variovorax paradoxus B4: VAPA_2c06140
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Entry
VAPA_2c06140 CDS
T02835
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_2c06140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c06140
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VAPA_2c06140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGU53173
UniProt:
T1XKR3
LinkDB
All DBs
Position
2:complement(629919..630932)
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AA seq
337 aa
AA seq
DB search
MTTASQPVLLVEGLKTQFATRAGIVKAVDDVSFSIERGQIMGLVGESGSGKSMTGYSLIG
LIDPPGQVVAGRLRLAPRTGEVLDLRRLSPRALQGVRGNRIAMIFQDPMMTLNPVLRIDT
QMIEAVRAHHRVSERVARERAAAALAKVGIPSPHERLLAYPHQFSGGMRQRVAIAIALLN
EPDLIIADEPTTALDVTVQGQILAQMQGLCRASGTALIWISHDLSVVAGLADTVSVMYAG
RIVEQGPVAEVLDRPRHPYTRGLIASAPSRNPRGRPLQQIPGMTPSLLALPQGCAFQARC
ASANAVCRNEPPLVALDGRRLRCFHPTPLPSSCTIAN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcatctcaacccgtgctgctcgtcgagggcctgaagacgcagttcgccacc
cgcgcgggcatcgtgaaggccgtggacgacgtgtcgttctcgatcgagcgcggccagatc
atgggcctggtcggcgagtcgggctcgggcaagtcgatgacgggctactcgctcatcggg
ctgatcgacccgccgggccaggtggtcgcgggccgcctgcgcctcgcgccgcgcaccggg
gaggtgctcgacctgcggcgcctgtcgccgcgcgcgctgcagggcgtgcgcggcaaccgc
atcgcgatgatcttccaggatccgatgatgacgctgaacccggtgctgcgcatcgacacg
cagatgatcgaggcggtgcgcgcgcaccaccgggtcagcgagcgcgtggcgcgcgaacgc
gctgctgccgcgctggcgaaggtcggcattccgtcgccgcacgagcgtctgctggcctat
ccgcaccagttctcgggcggcatgcgccagcgcgtggcgatcgcgatcgcgctgctcaac
gagcccgacctgatcatcgcggacgagccgaccaccgcgctcgacgtcacggtacagggc
cagatcctcgcgcagatgcagggcctgtgccgcgcatcgggcacggcgctgatctggatc
tcgcacgacctgtcggtggtggcggggctggccgacacggtctccgtgatgtatgccggg
cgcatcgtcgagcagggcccggtggcggaggtgctcgatcggccgcgccacccgtacacg
cgcgggctgatcgcgagcgcgccttcgcgcaacccgcgcggccgcccgctgcagcagatt
cccggcatgacgccctcgctgctcgcactgccgcagggttgcgcattccaggcgcgctgc
gccagcgcgaatgccgtctgccgcaacgagccgccgctggtggcgctcgacggccgccgg
ctgcgctgcttccacccgactcccctgccctcctcctgcacgatcgcgaactga
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