Variovorax paradoxus EPS: Varpa_0290
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Entry
Varpa_0290 CDS
T01392
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase, B subunit
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_0290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_0290
Enzymes [BR:
vpe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
Varpa_0290
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
Varpa_0290
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Varpa_0290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ADU34512
UniProt:
E6V1E8
LinkDB
All DBs
Position
complement(304966..306456)
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AA seq
496 aa
AA seq
DB search
MSETVNTFEAQQQGRPTGPLVRGYEVIIGFETHAQLSTNSKIFSRASTAFGAEPNTQACA
VDLALPGTLPVMNKGAVERAIKLGLALGSHVAPRSVFARKNYFYPDLPKGYQISQFEIPV
VQGGSVSFFLGEEKKTVRLVRAHLEEDAGKSLHEDFIGQSGIDLNRAGTPLLEIVTEPDM
RSTAEAVAYARELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGDKLGTRREIKNLNSFK
FMQQAIDYEIRWQIEEIEDGRKVEQATVLFNPDTGETRAMRAKEDSADYRYFPDPDLPPL
VIAADWIERVRGEMPELPRAMAERYVRDHGLSEYDAAQLTQSLALAHYFDEAVKAGATPK
LASNWITGEMARRLNAKEIGIEAAPVSAQQLGQLVKRIADGTLPNNAARQVFDALWIGEG
SDVDAIIEAKDLKPMADTGALDAILDEVIARNAKNVEEYRGGKEKALNGLVGQVMKASGG
KANPAQVTELLKAKLG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccgtgaacacattcgaagcacaacaacaaggccgcccgaccggcccgctg
gtgcgcggctatgaagtcatcatcggcttcgagacgcacgcgcagctgtcgacgaacagc
aagatcttcagccgcgcctccacggccttcggcgccgagccgaacacgcaggcctgcgcg
gtggacctcgcgttgcccggcacgctgccggtgatgaacaagggcgcggtcgaacgcgcc
atcaagctgggcctcgcgctcggctcgcacgtggcgccgcgcagcgttttcgcgcgcaag
aactacttctatcccgacctgcccaagggctatcagatcagccagttcgagattccggtc
gtgcagggtggctcggtgtcgttcttcctcggcgaagagaagaagaccgtgcgcctcgtg
cgcgcccacttggaagaagacgcgggcaagtcgctgcacgaggacttcatcggccagagc
ggcatcgacctgaaccgcgccggcacgccgctgctggaaatcgtgaccgagcccgacatg
cgctccaccgccgaggccgtggcttatgcgcgcgagctgcacaagatcgtcacgtggatc
ggcatctgcgacggcaacatgcaggaaggcagcttccgctgcgacgccaacgtgtcggtg
cgcaagcccggcgacaagctgggcacgcggcgcgagatcaagaacctgaacagcttcaag
ttcatgcagcaggcgatcgactacgagatccgctggcagatcgaggagatcgaggacggc
cgcaaggtcgagcaggcgacggtgctcttcaaccccgacaccggcgagacgcgcgcgatg
cgcgccaaggaagactcggccgactaccgctacttccccgaccccgacctgccgccgctg
gtgattgcggccgactggatcgaacgcgtgcgcggcgaaatgcccgagctgccgcgcgcg
atggccgagcgctatgtgcgcgaccatggcctgtcggaatacgacgcggcgcagctcacg
cagagccttgcgctcgcgcactatttcgatgaagcggtgaaggccggcgcgacgccgaag
ctcgcgagcaactggatcaccggcgagatggcgcgtcgtctgaacgcaaaagagatcggc
atcgaagcggcaccggtcagcgcgcagcagcttggccagctggtcaagcgcatcgccgac
ggcacgctgccgaacaacgcggcgcgccaggtgttcgatgccctctggatcggcgaaggc
agcgacgtggacgcgatcatcgaggccaaggacctgaagccgatggccgacaccggtgcg
ctcgacgcgatcctcgacgaagtcatcgccaggaacgcgaagaacgtcgaggaataccgc
ggcggcaaggagaaggcgctcaacggcctcgtgggtcaggtgatgaaggccagcggcggc
aaggccaaccccgcgcaggtcaccgagctgctgaaagccaagctgggctga
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