Variovorax paradoxus EPS: Varpa_0448
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Entry
Varpa_0448 CDS
T01392
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03030
DNA replication
vpe03430
Mismatch repair
vpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Varpa_0448
03430 Mismatch repair
Varpa_0448
03440 Homologous recombination
Varpa_0448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpe03032
]
Varpa_0448
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_0448
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Varpa_0448
DNA replication proteins [BR:
vpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Varpa_0448
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Varpa_0448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ADU34670
UniProt:
E6V4C4
LinkDB
All DBs
Position
483793..484866
Genome browser
AA seq
357 aa
AA seq
DB search
MQLASAQLGGHLQKGLKPLYTIHGDEPLLAQEAADAIRAAAREQGYTERSSYTVAGAHFD
WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSTALQQLAEAAPGNDSTLTLVMLPRLD
KATRTGAWFSALENNGVSIQVDPVERNVLPQWIAQRLGQQGQRVMPGDEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELSWEQVEGAVNNVARYDVFKLSEAVLAGNPQRVARML
DGLQAEGEAEVLVHYTIAEDIRALKRVKDAMAAGRPLPMALRENRIWGPRERAFERVLPR
LDDRMLARLLRAAHLVDGICKGLKQPDWPASGWQALQRLALMLCRACSSAPAAARRA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgccagcgcccaactcgggggccacctgcagaaggggctcaagccgctctac
acgatccatggcgacgagccgctgctcgcgcaggaggcggccgacgccatccgcgccgcc
gcgcgcgagcagggctacaccgagcgcagctcgtacaccgtggccggcgcgcacttcgac
tggagcgcggtgctggcggcggggggctcgctctcgctcttcgccgacaagcagatcgtg
gagatccgcatcccttcgggcaagcccggcaaggacggcagcacggcgttgcagcaattg
gccgaagccgcgcccggcaacgacagcacgctcacgctggtgatgctgccgcgcctggac
aaggccacgcgcaccggcgcctggttctcggcgctggagaacaacggcgtgagcatccag
gtcgatccggtagagcgcaatgtgttgccgcagtggatcgcgcagcgcctcgggcaacag
ggccagcgcgtgatgccgggcgacgaaggccagcgcacgctgcagttctttgccgaccgc
gtcgaaggcaacctgctcgcggcgcaccaggaaatccagaagctcgcgctgctgcacccg
gcgggcgagctgagttgggagcaggtcgaaggcgcggtcaacaacgtggcgcgctacgac
gtgttcaagctttccgaagcggtgctggccggcaatccgcagcgtgtggcgcgcatgctc
gacggcctgcaggccgaaggcgaggccgaggtgctggtgcactacacgatcgccgaggac
attcgcgccctgaagcgcgtgaaggacgccatggccgccggtcggccgctgccgatggcg
ctgcgcgagaaccgcatctggggcccgcgcgaacgcgccttcgagcgcgtgctgccccgg
ctggacgaccgcatgctggcacgcctgctgcgcgcggcccacctggtggacggcatctgc
aagggcctgaagcagcccgactggcccgccagcggctggcaggcgctgcagcggctcgcg
ctgatgctgtgccgtgcgtgcagcagcgcgccggcggccgcgcgccgcgcctga
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