KEGG   Variovorax paradoxus EPS: Varpa_2176
Entry
Varpa_2176        CDS       T01392                                 
Name
(GenBank) transcription factor jumonji jmjC domain-containing protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpe03009]
    Varpa_2176
Enzymes [BR:vpe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     Varpa_2176
Ribosome biogenesis [BR:vpe03009]
 Prokaryotic type
  ribosomal protein modification factors
   Varpa_2176
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA AraC_binding Cupin_2 GPI
Other DBs
NCBI-ProteinID: ADU36382
UniProt: E6UUW7
LinkDB
Position
2364239..2365381
AA seq 380 aa
MEITQPLPLLGGLSAAQFMRRYWQKKPLLVRQAIPAMVPPIDRSALFALAEREEVESRLI
RHGKSGWSLKHGPLPRRALPPLKQPAWTLLVQGVDLHHDGVHDLLRQFRFLPDARLDDLM
ISYASDTGGVGAHFDSYDVFLLQAQGRRRWSIGKQGDLRLQPGVPLKILENFEPEETFVL
EPGDMLYLPPKYAHEGVAVGDDCMTFSIGLRSSALGELGADLLARMAQAYSEDLEDAGPA
ELTRYRDPTQPAVDAPAAMPAALQDFARKAVEAALRDPDAIARALGESLTEPKANIWFDE
GGDVPDAMQQVSLDRRTRMLYDTRHIYINGESFRAGGADAALMRKLADRRALGPRELARA
SEGALALLGEWCEAGWVHAD
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggagattacacaaccgctgccgttgctcggcggcctgagcgccgcgcagttcatgcgg
cggtactggcagaaaaagccgctgctggtccgccaggcaattcccgccatggtgccaccg
atcgatcgcagcgcgctgtttgcgctggccgagcgcgaagaggtggaatcgcgcctcatc
cgccacggcaaatcaggctggtcgctcaagcacggcccgctgccaagacgtgccctgcca
cccctcaagcaacccgcctggaccctgctggtgcaaggcgtcgacctgcaccacgacggc
gtgcacgacctgctgcggcagtttcgcttcctgcccgatgcgcggctggacgacctgatg
atcagctacgcgagcgacaccggcggcgtcggcgcgcatttcgacagctacgacgtgttc
ctgctgcaggcccagggccgccgccgctggtccatcggcaagcagggcgacctgcgcctg
cagccgggcgtgccgctcaagatcctcgagaacttcgagcccgaagagaccttcgtgctc
gagccgggcgacatgctctacctgccgccgaagtacgcccatgaaggcgtcgcggtgggc
gacgactgcatgaccttttccatcggcctgcgctcgtccgccctgggcgagctcggcgcc
gatctgctcgcgcgcatggcgcaggcctattcggaagacctcgaggacgccggccccgcg
gaactgacgcgctaccgcgacccgacgcagcctgcggtcgatgcccccgccgcaatgccc
gccgcgctgcaggacttcgcgcgcaaggccgtcgaggccgcgctgcgcgacccggacgcc
atagcccgcgcccttggcgaatcgctgaccgagcccaaggccaacatctggttcgacgaa
ggcggcgacgtgcccgacgcgatgcagcaggtatcgctcgatcgccgcacgcgcatgctc
tacgacacgcgccacatctacatcaacggcgagagctttcgtgcaggcggcgccgatgcc
gcgctgatgcgcaagctggccgaccggcgcgcgctcggcccgcgcgagctggcacgggcc
agcgaaggggcgttggcgctgctgggcgagtggtgcgaggcgggctgggttcatgccgac
tga

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