Variovorax paradoxus EPS: Varpa_2839
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Entry
Varpa_2839 CDS
T01392
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00330
Arginine and proline metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Varpa_2839
Enzymes [BR:
vpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Varpa_2839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Colicin-DNase
WHH
Motif
Other DBs
NCBI-ProteinID:
ADU37031
UniProt:
E6V4U5
LinkDB
All DBs
Position
3043574..3045871
Genome browser
AA seq
765 aa
AA seq
DB search
MKFRFPIVIIDEDFRSENTSGLGIRALAQAFESEGFEVLGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFTVGPDLDPAVLNLRTFIGEVRRKNADVPIYIYGETKTARHIPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLEGVQPPFFRALIDYAEDGSYSWHCPGHSGGVAFLKS
PVGRMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPDDVVVVDRNCHKSILHAIIMTGAIPVFMKPTRNHFGIIGPIPKSEFE
QSAIKAKIKANPLLADVDHEKVKPRVMTLTQSTYDGVIYNTETIKNMLDGYVDTLHFDEA
WLPHAAFHPFYGAYHAMGKRRVRPKESLVFATQSTHKLLAGISQASHVLVQDSQNRALDR
DLFNEAYLMHSSTSPQYAIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVEEEF
GKDEWWFKVWGPEKLVDEGIGRADDWIMKGEKDGKPKNKKSPRNWHGFGDLADGFNMLDP
IKSTIVTPGLDLEGNFAETGIPASVVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWNT
LLTALQQFKDDYARNQPMWRILPEFCQQHPGYERLGLRDLCQHIHQLYARYDVARLTTEM
YLSDLTPAMKPSDAFAHIAHRKTERVEIDELEGRITTSLITPYPPGIPLLIPGEVFNKKI
VDYLKFSREFNLQCPGFETDIHGLVARIDETGKKRYYADCVRKAG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgctttcccattgtcatcatcgacgaggacttccgctccgaaaacacttcg
ggcctcggcattcgcgcgctcgcgcaggccttcgaaagcgagggcttcgaagtgctgggc
gtcacgagctacggtgacctgagccaattcgcgcagcagcaaagccgagccagtgccttc
atcctgtcgatcgacgacgaggaattcacggtcggccccgatctcgatccggccgtgctg
aacctgcgcaccttcatcggcgaggtgcggcgcaagaacgcggacgtgcccatctacatc
tatggcgagacgaaaaccgcgcgccacattccgaacgacatcctgcgggagctgcacggc
ttcatccacatgttcgaggacacgccggagttcgtggcgcgccacatcatccgcgaggcc
aagagctacctggaaggggtgcagccgccgttcttcagggcgctgatcgactatgcggaa
gacggctcgtactcctggcactgcccgggccactcgggcggcgtggcgttcttgaagagc
ccggtgggccggatgttccatcagttcttcggcgagaacatgctgcgtgccgacgtctgc
aacgcggtcgaggaactgggccagctgctcgaccacaccggcccggtggcggccagcgag
cgcaatgcggcgcgcatcttcaacgccgaccactgcttcttcgtgaccaacggcaccagc
accagcaacaagatggtgtggcaccacacggtggcgcccgacgacgtcgtggtggtcgac
cgcaactgccacaaatcgatcctgcacgcgatcatcatgaccggcgcgattccggtgttc
atgaagcccacgcgcaatcacttcggaatcatcggcccgattcccaagagcgagttcgag
cagagcgccatcaaggccaagatcaaggccaacccgctgctggccgacgtggaccacgag
aaggtcaagccgcgcgtgatgacgctgacccagtcgacctacgacggcgtgatctacaac
accgagaccatcaagaacatgctcgatggctacgtcgacacgctgcacttcgacgaggcc
tggctgccgcacgccgctttccacccgttctatggtgcctaccatgcgatgggcaagcgc
cgcgtgcgtccgaaggaatcgctggtgttcgccacgcagtccacacacaagctgctggcc
ggcatcagccaggcgagccacgtgctcgtgcaggactcgcagaatcgggcgctcgaccgt
gacctcttcaacgaggcctacctgatgcactcgtccaccagtccgcagtacgcgatcatc
gcgagctgcgacgtggcggccgcgatgatggagccgcccggcggcaccgcactggtggag
gagagcattctcgaagcgctcgacttccgccgcgccatgcgcaaggtcgaggaagagttc
ggcaaggacgagtggtggttcaaggtctggggccccgaaaagctcgtcgacgaaggcatc
ggccgcgccgacgactggatcatgaagggcgagaaggacggcaagcccaagaacaagaag
agcccgcgcaactggcacggcttcggcgacctggccgatggcttcaacatgctcgacccg
atcaagtcgaccatcgtgacgcccggcctcgacctcgaaggcaacttcgcggagaccggc
attcccgcgagcgtggtgaccaagttcctcgccgagcatggcgtgatcgtggagaagacc
ggcctgtacagcttcttcatcatgttcaccatcggcatcaccaagggccgctggaacacg
ctgctcacggcgctgcagcagttcaaggacgactacgcgcgcaaccagccgatgtggcgc
atccttcccgagttctgccagcagcacccgggctacgagcgcctgggcctgcgcgacctg
tgccagcacatccatcagctctatgcacgctacgacgtggcgcgcctgacgaccgagatg
tacctgagcgacctcacgccggccatgaagccgagcgacgccttcgcccacatcgcgcac
aggaagaccgagcgcgtggaaatcgacgagctcgaaggccgcatcacgaccagcctgatc
acgccgtacccgccgggcattccgctcctgattccgggcgaagtgttcaacaagaagatc
gtcgattacctgaagttctcgcgcgaattcaacctgcagtgcccgggtttcgagaccgac
atccacggcctcgtggcgcgcatcgacgagacgggcaagaagcgctattacgccgactgc
gtgcgcaaggccggctga
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