Variovorax paradoxus EPS: Varpa_3944
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Entry
Varpa_3944 CDS
T01392
Name
(GenBank) phenylalanyl-tRNA synthetase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_3944
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_3944
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_3944
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Varpa_3944
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Varpa_3944
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Varpa_3944
Prokaryotic type
Varpa_3944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
CHDCT2
Motif
Other DBs
NCBI-ProteinID:
ADU38116
UniProt:
E6V3Z7
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All DBs
Position
complement(4255721..4256797)
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AA seq
358 aa
AA seq
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MNELDSLAATARAAFAEAKTPAELENAKAQFLGKSGRITELMKGMAALSVEEKKSRGAAI
NVAKQAIEAALTDRRQQLADEELSLQLRAEALDVSLPGRRRIPGSLHPVSRTLERIEEIF
SSMGFDVADGPEIESDWHSFTSLNNPPNHPARSMQDTFYVDLNGDDGIPYNLRPHTSPMQ
VRYAHQHIKKYAAEFAAAAADTTGTVKAPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWL
GENVSFKDLKVIFTDFCRTFFERDDLVLRFRPSFFPFTEPSAEIDIQFASGPLAGRWLEV
SGSGQVHPNVVRNMGLDPERYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDLRFLSQFQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttggactcccttgcagccaccgcccgcgccgccttcgccgaagcgaaaacg
cccgccgagctcgaaaacgccaaggcccagttccttggcaagtcgggccgcatcaccgag
ttgatgaagggcatggccgcgctgagtgtcgaagagaagaagtcccgcggtgccgcgatc
aatgtcgccaagcaggccatcgaggccgcgctgaccgaccgccgccagcaactggccgac
gaagaactctccctgcaactgcgtgccgaagcgctcgatgtgagcctgcccggccgccgc
cgcatccccggcagcctgcaccccgtgagccgcaccctggagcgcatcgaggagatcttc
tcgagcatgggcttcgacgtggccgacggccccgagatcgagagcgactggcacagcttc
acctcgctcaacaacccgccgaatcatcctgcgcgctcgatgcaggacaccttctacgtc
gatctcaacggcgatgacggcatcccctacaacctgcgtccgcacaccagcccgatgcag
gtgcgctatgcgcatcagcacatcaagaagtacgcggccgaatttgccgctgctgcagcc
gacaccaccggcaccgtgaaggcgcccgagatccgcgtgatcgcccccggccgcacctac
cgtgtcgacagcgacgccacccactcgcccatgttccaccagtgcgagggcctctggctc
ggcgagaacgtgagcttcaaggacttgaaggtcatcttcaccgacttctgccgcaccttc
ttcgagcgcgacgacctcgtgctgcgcttccgcccgagcttctttccgttcaccgagccc
agtgcagaaatcgacatccagttcgcgagcggaccgctggccggccgctggctcgaggtg
tcgggctccggccaggtgcatccgaacgtggttcgcaacatggggctcgaccccgagcgc
tacatcggcttcgccttcggcatgggccccgaccggctcacgatgctgcgctacggcgtg
aacgacctgcgcctcttcttcgacggcgacctgcgttttctctcgcagttccagtaa
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