KEGG   Variovorax paradoxus EPS: Varpa_4983
Entry
Varpa_4983        CDS       T01392                                 
Name
(GenBank) type III secretion protein, HrcV family
  KO
K03230  type III secretion protein V
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Varpa_4983
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_4983
Secretion system [BR:vpe02044]
 Type III secretion system
  Type III secretion core apparatus
   Varpa_4983
SSDB
Motif
Pfam: FHIPEP
Other DBs
NCBI-ProteinID: ADU39143
UniProt: E6V264
LinkDB
Position
complement(5424555..5426627)
AA seq 690 aa
MARNPRPDRQGGSRWRELASNAGRYNDLLLAGLLVVVVALFVLPLPTALLDLLIAANLAI
SLVLLIVAMYVPSALSLSTFPSLLLFTTLFRLALNIASTKLILLHAHAGNIIDTFGKLIV
GNNVVVGGVVFLIIAIVQFIVIAKGSERVAEVAARFALDAMPGKQMSIDADVRAGALSSA
QAQKRRQLLEQESQLHGAMDGAMKFVKGDAIASIVIALINILAGLTIGTLMRDMSLGAAL
QRYAILTVGDGMVSQIPSLLVSIAAGIVITRVSTSDKRDSQLARQIGEQLTAHPRALMIA
GIAIASFALVPGFPKWVFGLLGAVLLGGGFAVRRLRSHGGTPDWISSDDSLFAEAQEGDN
AIAAPLSLRFSQGLRRDFDRHLLNDRLAEVKRSVESDLGPIFPRLQLSHSDALPEHDYQV
LVHDVAVARGTLRPGWLLLDPAAGMHMPAGAEVGEAFGPFARVVWVRNPEPGLAAWRGEE
IVALHLDHAVRCSVKELIGLQEVQRLLHAVQREAPELAAEVARTASTQRIAEVLRRLLQE
GIPIRNLHAIFEALTIWAPKEQDGIALTEQVRAHLGRYITSRYVGPNRQLEAILFESSLL
ERLFKAVDRTPHGNLLLLSPAVAQDIREQVRRILGSTANRVVAIASADVRRYVKTLLEPV
APQLTVLSYQEIDDDVALQPVGWVTNPQAH
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcaaggaatccgcgacccgatcgacaaggcggcagccgatggcgcgagctcgccagc
aacgcgggccgctacaacgacttgctgctcgccggactgctcgtggtggtggtggcgctg
ttcgtgctgccgctgcccacggcgctgctcgacctgctgatcgcggccaaccttgcaatc
agcctggtgctcctgatcgtggcgatgtacgtgccttcggcgctgtcgctgtcgaccttt
ccgtcgctgctgcttttcaccacgctctttcgcctggcgctgaacatcgcatcgaccaag
ctgatcctgctgcacgcgcatgcgggcaacatcatcgacaccttcggcaagctcatcgtg
ggcaacaacgtggtggtcggaggcgtggtgttcctcatcatcgccatcgtccagttcatc
gtcatcgccaaggggtcggagcgggtcgccgaagttgccgcgcggttcgcgcttgacgcg
atgcccggcaagcagatgagcatcgatgcagacgtgcgtgcgggcgccttgtcctcggcg
caggcgcaaaagcgacgccagctcctggagcaggagtcgcagctgcatggcgcgatggac
ggcgcgatgaagttcgtgaagggcgacgcgatcgcaagcatcgtgatcgcgctcatcaac
atcctggcggggctgaccatcggcaccctgatgcgcgacatgagcctgggcgccgcgctg
cagcgctacgccatcctcacggtcggcgacggcatggtgtcgcagatcccgtcgctgctg
gtctccatcgccgcgggcatcgtgatcacgcgcgtgagcacgagcgacaagcgcgactcc
cagctcgcgcgccagatcggcgaacaactcacggcgcacccgcgcgcgctcatgatcgca
ggcatcgcgatcgcaagcttcgcgctggtgccgggttttccgaagtgggtgttcggcctg
ctcggcgccgtgctgcttggcggcggcttcgccgtgcggcggctgcgcagccacggcgga
acgcccgattggatctccagcgacgacagcctgttcgccgaagcgcaggagggcgacaac
gccatcgcggcgccgctttctctgcgtttttcgcaggggttgcgcagggacttcgaccgc
cacctcctcaacgaccgcctcgccgaggtcaagcggtcggtcgagagcgatctcggcccg
atctttccgcgcctgcaactgagccattccgatgcgctgcccgagcacgactaccaggtg
ctggtgcacgacgtggcggtggcgcgcggcacgctcaggcccggctggctgctgctggac
cccgcggcaggcatgcacatgccggcgggagcggaggtcggcgaggccttcgggccgttc
gcccgtgtcgtgtgggtgcgcaacccggagccgggcttggccgcctggcgcggcgaggag
atcgttgcgcttcacctcgatcacgcggtgcgctgcagcgtgaaggaactcatcggcttg
caggaggtgcagcgcttgctgcacgcggtgcagcgcgaggcgcccgaactcgccgcggag
gtggcgcgcaccgcctccacgcagcgcatcgccgaggtgctccggcgcctgctgcaggag
ggcattccgatccgcaatctgcacgccatcttcgaggcgctcaccatctgggcgccgaag
gagcaggacggcatcgcgctcaccgagcaggtgcgcgcccacctggggcgctacatcacc
agccgctatgtcggacccaaccgccagctcgaggcgatcctgttcgagtcgagcctgctg
gagcgcctcttcaaggcggtggaccgcacgccccacggcaacctgttgctcctgagcccc
gcggtcgcgcaggacattcgcgagcaggtgcgccgcatcctcggctccacggccaaccgc
gtggtcgccatcgcctcggccgacgtgcggcgctacgtgaagacgctgctggagccggtc
gctccgcagctcacggtgctttcttaccaggaaatcgacgacgacgtggccctgcagccg
gtgggctgggtcaccaatccgcaagcccattga

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