Variovorax paradoxus EPS: Varpa_5762
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Entry
Varpa_5762 CDS
T01392
Name
(GenBank) preprotein translocase, SecY subunit
KO
K03076
preprotein translocase subunit SecY
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
vpe03060
Protein export
vpe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Varpa_5762
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Varpa_5762
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5762
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpe02044
]
Varpa_5762
Secretion system [BR:
vpe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Varpa_5762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
ADU39914
UniProt:
E6UWI4
LinkDB
All DBs
Position
complement(6267449..6268762)
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AA seq
437 aa
AA seq
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MATNAATIAKTGKFGDLRRRLVFLLLALVVYRIGAHIPVPGINPDQLAALFQGQQGGILS
LFNMFSGGALSRFTVFALGIMPYISASIIMQLMTYVLPTFEQLKKEGEAGRRKITQYTRY
GALGLALFQSFSIAVALESSAGLVIAPGFGFRLTAMVSLTAGSMFLMWLGEQITERGLGN
GISILIFAGIAAGLPSAVAGLGSLVTTGAMNPIVALFIIAVVVLVTYFVVFVERGQRKIL
VNYARRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILLPATVVGWFSTGEGGFRWIK
DIANALRPGEPIYVLLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFIPGIRPGDQTAR
YIDKILVRLTLAGAVYITFVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYM
MSQQYESLLKKANFKTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaacgcggcaacgatcgcaaaaacaggcaagttcggcgacctccgtcgtcgg
ctcgtctttttgctgctcgcgctcgtggtctaccggattggcgcgcacattcctgtgccg
ggtatcaacccggaccagttggcagcgttgttccagggccagcagggcggcattctgagc
ctgttcaacatgttctcgggcggggcgctgtcgcgcttcaccgtgttcgcgttggggatc
atgccgtacatctcggcgtcgatcatcatgcagctgatgacctacgtgcttccgaccttc
gagcaattgaagaaggaaggcgaggccggccgccgcaagatcacgcagtacacgcgctat
ggcgcgctcggtctggctctgttccagtcgttcagcatcgcagtggccctcgagtcgtca
gctggtctggtgatcgcccccggttttggcttccgcctgacggccatggtgagcctgacg
gcaggttcgatgttcctgatgtggctcggcgagcagatcaccgaacgcggcttgggcaac
ggcatctcgatcctgatctttgcgggtatcgcggcaggtttgccgagcgccgtggcgggt
ctgggttcgctggtgaccaccggtgcgatgaacccgatcgttgcgctcttcatcatcgcg
gtggtggtcctcgtgacctacttcgtggtgttcgtcgaacgcggccagcgcaagatcctc
gtgaactatgcgcggcgccaggttggcaacaaggtctatggcggccagtcgtcgcacctg
cccttgaagctgaacatggccggtgtgattccgccgatcttcgcttcgtcgatcatcctg
ctgcccgcaacggtggttggctggttcagtaccggtgaaggtggcttccgctggatcaag
gacattgccaacgcactgcgtccgggcgagccgatctacgtgctgctgtacgctgccgcg
atcgttttcttctgcttcttctacacggcactcgtgttcaacagcaaggaaacggccgac
aacctgaagaagagtggtgcattcattcctggcattcgcccgggtgaccagaccgctcgc
tatatcgacaagattctggttcgcctgacgttggccggcgcggtgtacatcaccttcgtc
tgcctgctgcccgagttcctgatcctgaagtacaacgtaccgttctacttcggtggtacc
tccctgctgatcatcgtggtcgtcacgatggacttcatggcccaggtacaaaactacatg
atgtcccagcagtacgaatcgctgctgaagaaggcgaacttcaagacatcgtag
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