Vagococcus penaei: BW732_04545
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Entry
BW732_04545 CDS
T04715
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vpi
Vagococcus penaei
Pathway
vpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BW732_04545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpi03021
]
BW732_04545
03400 DNA repair and recombination proteins [BR:
vpi03400
]
BW732_04545
Enzymes [BR:
vpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BW732_04545
Transcription machinery [BR:
vpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BW732_04545
DNA repair and recombination proteins [BR:
vpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BW732_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AQP53570
UniProt:
A0A1Q2D590
LinkDB
All DBs
Position
complement(957550..961125)
Genome browser
AA seq
1191 aa
AA seq
DB search
MVGHVVKYGKHRERRSYSRINEVLELPNLIEIQTDSYKWFLDEGLREMFEDILPITDFSD
KLSLEFVDYEMKEPKYTVEEARAHDANYSAPIHVTLRLDNQVTGEIKSQEVFFGDFPLMT
EMGTFIINGAERVVVSQLVRSPGVYFNAKQEKNGQEGFGTTIIPNRGAWMELETDAKGLS
FARIDRTRKIPLTVVVRALGFGDDSTIMEIFGESESLTETIGKDIKKESGGTRVEEALKD
VYERLRPGEPKTAESSRNLLNARFFDPKRYDLANVGRYKVNKKLTLKTRLLNQTLAETLV
DPETGEIIVEKGTVVTHTVMEKLESYLDAGLNNVTFYPSEDGVVTEPMTIQVIKVFSPKD
PERVVNMIGNGNLDATVKTIRPADIIATMGYFFNLMEGIGKVDDIDHLGNRRIRSVGELL
QNQFRIGLSRMERVVRERMSIQDTETLTPQQLINIRPVVASMKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
VNRYGFIETPYRRVDRATGRVTDRIDYLTADEEDHYMVAQANSRLNDDGTFAEPVVMARL
QSENLEVAVEKVDYMDVSPKQVVAVATSCIPFLENDDSNRALMGANMQRQAVPLIQPRSP
LVGTGMEYIAAHDSGAALLCKHDGVVEFVDAKQVRVRRDNGTLDKYNIIKFHRSNAGTSY
NQRPIVRLGERVDAGDALADGSSMEEGELALGQNVLVAFMTWEGYNYEDAIIMSRRLVKD
DVYTSIHIEEYESEARDTKLGPEEITRELPNVGEDALKDLDEMGIIRIGAEVKDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREGGDELAPG
VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVPS
RMNIGQVLELHLGMAARSLNIHVATPVFDGADEEDVWSTVEEAGLARDAKTVLYDGRTGE
PFDNRISVGVMYMLKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYESIVKGEPIQKPGVPESFRVLVKELQALGLDMRV
LDADDQEIELRDMDDDDDDLITVDALAKYAKEQAEKEQAEKSLKDAQENQE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttggttggacacgtagtaaaatacggaaaacaccgggaaagacgcagctattctagaatt
aatgaagtcctagaactgccaaatttaattgaaattcaaacagattcgtacaagtggttt
ttagatgaaggtttaagagaaatgtttgaagacattttaccaatcacagattttagcgat
aaattatcattagagtttgttgattatgaaatgaaagaacctaaatacactgttgaagaa
gcacgtgcacatgacgctaactattcagctccgattcacgtgactctacgtttagacaat
caagtgacgggtgaaattaaatcgcaagaagtgttctttggtgattttccattaatgact
gaaatgggtacatttatcatcaatggtgctgaacgtgttgttgtatcacagttagttcgt
tctcctggagtttattttaacgcgaaacaagagaaaaatggacaagaaggctttggtaca
acaattatccctaaccgtggagcttggatggaattagaaactgatgcgaaaggtctatcg
tttgcacgtattgaccgtacgcgtaagattcctttgactgttgttgtgcgggctttaggt
tttggtgatgatagtaccattatggaaatctttggtgaaagtgaaagcttaactgaaacc
attggaaaagacatcaaaaaagaaagtggcggcacgcgtgttgaggaagccttaaaagat
gtttacgaacgtctacgtccaggtgagccaaaaacagcagaaagttcacgtaacttatta
aatgctcgtttctttgatccaaaacgctacgacttagcaaatgttggtcgttacaaagta
aataaaaaattaacgcttaaaacacgtttattaaatcaaacgttagctgaaacattagtc
gaccctgaaactggtgaaattattgtcgaaaaaggaacagttgtgacacacactgttatg
gaaaaattagaaagttatttagatgcaggtctaaacaatgtaacgttctatccttctgaa
gacggtgttgtgactgaaccaatgacaatccaagtcattaaagtcttctcaccaaaagac
ccagaacgtgtcgttaatatgattggcaatggtaatttagatgctactgttaaaacaatt
cgtccagcggatatcattgcgacaatgggttacttctttaacttaatggaaggtatcggt
aaagttgacgatatcgaccacttaggtaaccgtcgtatccgttcagttggtgaattatta
caaaatcaattccgtattggtttatcacgtatggaacgtgtggtacgtgagagaatgtca
atccaagatactgaaacattgacacctcaacaattaattaatattcgtcctgttgtggct
tcaatgaaagaattcttcggttcttctcagttatcacagttcatggatcaaaccaatcca
ctgggtgagttaacccacaaacgtcgtctatcagccttagggcctggtggtttaacacgt
gaccgtgccggatatgaagtgcgtgacgtgcattactctcactatggtcgtatgtgtccg
attgaaacgcctgagggaccaaacattgggttaatcaatagtttgtctagctatgcgaaa
gtgaaccgttatggttttattgaaacaccttaccgtcgtgtggatcgtgcaactggtcgt
gtaactgaccgtatcgattatttaacggctgatgaggaagaccactatatggtagcgcaa
gctaactctcgtttaaatgatgatgggacatttgctgagccagtagtaatggcgcgtttg
caaagtgaaaacttagaagttgctgttgaaaaagtcgattacatggacgtatcacctaaa
caagtagttgcagttgcgacatcatgtattcctttcttggaaaacgatgactccaaccgt
gccttgatgggtgccaacatgcagcgtcaagcagtgccgttgattcaaccacgttctcca
ttagttggaactggtatggaatatattgcagcccatgactctggtgccgctctattatgt
aaacacgatggtgttgttgagtttgtggatgcaaaacaagttcgtgtacgtcgtgacaat
ggaacattagataaatataatattattaaattccaccgttcaaacgctggtacaagctat
aatcaacgtccaatcgttcgtttaggtgaacgcgttgatgcaggggatgcattagccgat
ggttcttctatggaagaaggcgaattagctctaggacaaaacgttttagtggccttcatg
acttgggaaggatataactatgaagatgcgattatcatgagtcgtcgtttggttaaagat
gatgtgtatacgtcaattcatattgaagaatatgaatctgaagcacgtgacacaaaatta
ggacctgaagaaatcacgcgtgaattaccaaacgttggtgaggatgcgctaaaagattta
gacgagatgggtattatccgtattggtgctgaagtgaaagatggcgatttattagttggt
aaagtaacgcctaaaggtgtaacagaattatcagctgaagaacgcttattacacgctatt
ttcggtgaaaaagcgcgtgaagttcgtgatacatcactacgtgtaccacatggtggtggc
ggtattgttcatgacgtgaaaatctttacacgtgaaggtggagatgaattagcaccaggt
gttaatatgttagtccgtgtatatattgtccaaaaacgtaaaattcatgaaggtgataag
atggctggacgtcatggtaataaaggggtagtttctcggattatgcctgaggaagacatg
ccattcttaccagacggtacaccagttgatatcatgttaaacccattaggggtaccttct
cgtatgaacattgggcaagtgctagaactccacttagggatggcagcacgctcattgaat
attcatgttgctacaccagtatttgatggagcagatgaagaagatgtatggagtacggtt
gaagaagctggattagcacgtgatgcaaaaacagttctttacgacggtcgtaccggagaa
ccttttgacaaccgaatttcggttggggtaatgtatatgctgaaacttgctcacatggtt
gatgataaattacatgctcgttcaattggaccatattcattagtaacacaacaacctctt
ggtggtaaagcacaatttggtggacaacgttttggtgagatggaagtttgggcacttgaa
gcttacggtgctgcttatacactacaagaaatcttaacttacaagtccgatgacgttgtt
ggtcgtgtgaaaacatacgaatcgatcgttaagggtgaacctatccaaaaaccaggagtt
cctgaatcattccgcgtattagttaaagagttacaagctctaggtttagacatgcgtgtc
cttgatgcagatgatcaagaaattgaattacgtgatatggacgatgacgatgatgacttg
attacagtcgatgctttagccaaatatgctaaagaacaagctgaaaaagagcaagctgaa
aaatcgttgaaagatgcacaagaaaaccaagaatag
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integrated database retrieval system
