Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_06985
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Entry
M636_06985 CDS
T02760
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00330
Arginine and proline metabolism
vpk00480
Glutathione metabolism
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
M636_06985
09106 Metabolism of other amino acids
00480 Glutathione metabolism
M636_06985
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
M636_06985
Enzymes [BR:
vpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
M636_06985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGQ97001
LinkDB
All DBs
Position
II:complement(1544447..1546627)
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AA seq
726 aa
AA seq
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MKRLIIGVSNYMPEDFSLLAESLDEQFNRHLQPLEQVELTDVGAAIITSADIKAGLHKMI
SETGYGIPVFLVTDENPVSAEDYVWLTGVIDLERQSIEYYCRQINEAVTKYECRLLPPFF
KQLTHYVEMGNSAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIH
EGSAHQAQAHAAKVFNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSNHHGAL
IQAGGMPVYLETARNPWGFIGGMDEHCFDEEYIRAQIAKVDPERARDERPFRLAIIQLGT
YDGTIYNARYVMDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQS
VHKQQAGFSQTSQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAKIH
DGEAGLRLWRDAVKTGIEARKEILKSCELIRPFIPDEVEGQPWGSYDTDVIATNKKFFMF
EPNASWHKFEGYGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEK
CDLNSILFLLTPAEDMGKIRHLVAQINRFEKFIRDDAPLSIVLPSVYEANKERYRGYTIR
QLCQEMHDMYKELNVKQLQKAMFRSEYFPQMVHKPDVATRKYFRGECDYLPLKEAVGRVA
AEGALPYPPGIICVITGEIWTPHVVDYFLSLEEGINRFPGFAPEIQGVYLEDVNGRTTAH
CYVLKD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttaattataggtgttagtaattacatgccagaagacttcagtttattagct
gaatctttagatgaacaatttaatcgtcatttacaacctttagagcaagttgaattaacc
gacgttggtgcggctattattacttcagcagacattaaagcaggtctgcataaaatgatt
tctgaaacgggttacggtattccagttttcttagtaacggatgaaaacccagtttcggca
gaagattacgtttggctaactggcgttatcgatttagaaagacaatctattgagtactac
tgtcgtcaaatcaacgaagcagtaaccaagtacgaatgtcgtctgcttcctcctttcttc
aagcaattaacgcactatgttgagatgggtaactcagcgtttgactgtccgggacaccaa
ggtggtcagttcttcaaaaaacacccagctggtaaacaattctacgatttcttcggcgaa
aacctgttccgtagtgacttgtgtaacgcggacgtggatttaggtgacttgctgatccac
gaaggttctgcacaccaagcgcaagcgcacgctgcaaaagtatttaacgcggacaaaact
tacttcgtactcaacggtacttctgcttcaaacaaagtggtgtgtaacgcgctagtaact
gaaggtgatttggtactgttcgaccgtaacaaccacaaatcgaaccaccacggtgcgtta
atccaagcgggtggtatgccagtttacttagaaacggcgcgtaacccttggggcttcatc
ggtggtatggatgagcactgtttcgatgaagaatacattcgtgctcaaatcgcgaaagtg
gatccagaacgtgcacgcgatgaacgtcctttccgtcttgctattatccagcttggtact
tacgacggtactatctacaacgctcgttacgtgatggataagatcggtcatctttgtgac
tacatcctgtttgactctgcgtgggttggttatgagcagttcatccctatgatgaaagat
tgttcaccactgctgctggatttgaaaccagaagacgcaggtgtgatcgtgactcagtct
gttcacaaacaacaagctggcttctctcaaacatcgcaaatccacaaaaaagaccgccat
atcaaaggtcaagctcgttactgtaaccacaaacgctttaacaacgcgtttatgatgcac
gcatcgacttcaccattctacgcactgttctctgcgcttgatgtgaacgcgaagatccac
gatggcgaagcaggtctgcgtttatggcgtgatgcggttaagactggtatcgaagcgcgt
aaagaaatccttaagagttgtgaattgattcgtccgttcattccagacgaagtcgaaggt
caaccttggggcagctacgacactgacgtgatcgcaacgaacaagaaattcttcatgttt
gagccaaacgcaagctggcacaaatttgaaggttacggtgaaggtcaatacttcgttgac
ccatgtaaattgttgctaactactgcgggtattgcagaagacggcagctacgcagatttc
ggtattcctgcaacgctattggcgaacttccttcgtgaaaacggcatcatccctgagaag
tgtgacttgaactctatcttgttcctactcactcctgcggaagatatgggtaagatccgt
caccttgtggctcaaattaaccgattcgaaaaattcatccgtgatgatgcgcctctaagt
atcgtacttccaagcgtctacgaagcgaataaagaacgctaccgtggctacaccatccgt
cagctatgtcaggaaatgcatgacatgtacaaagagctgaacgtgaaacagctacaaaaa
gcgatgttccgcagcgagtacttcccacaaatggttcacaaaccagacgtggcgacacgc
aaatacttccgtggtgaatgcgattacctaccacttaaagaggccgttggtcgcgtagcc
gctgagggtgcacttccttaccctccaggcatcatctgtgtgatcactggtgaaatctgg
accccacacgtggtggattacttcctatctctagaagaaggcattaaccgcttcccaggc
ttcgcgccagaaattcaaggtgtgtaccttgaagatgttaacggtcgcactaccgcacat
tgttatgtcctaaaagattaa
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