Vanderwaltozyma polyspora: Kpol_1050p112
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Entry
Kpol_1050p112 CDS
T01049
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
vpo
Vanderwaltozyma polyspora
Pathway
vpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kpol_1050p112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpo03019
]
Kpol_1050p112
Messenger RNA biogenesis [BR:
vpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
Kpol_1050p112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_1
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_12
TPR_14
ANAPC3
TPR_8
TPR_7
Alkyl_sulf_dimr
DUF7017
TPR_9
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
5547587
NCBI-ProteinID:
XP_001647110
UniProt:
A7TF06
LinkDB
All DBs
AA seq
1027 aa
AA seq
DB search
MSSVKDLLKEAKNELARGDYEEAIEISKEVLKKEENNYFAYVFMGKAYSCIANSVEEALN
SYIRATELVPSNVLGWKGLFLLINSNDVLPTHLTFNKYFDLCGDYSNVLLSQELPLVDLI
HEMRTIRKKYPDCEESFLRHMCPGSQMGESISRHFITPQECLSKLIQIINSKEKEQVSKI
VSRERLKLSANDPLYQTKINSLAWEVYQSSDVEDLYVQLINISDDDEERSKFEEELLDHR
IVVLKSMPIDLKGSYFQKVKSMVEDMVLVGTKSEKAWKLYFEWQDCTDLNSLDGQIVMKY
FTTFPKEPLSVILYAWVCSKYSSYDIKQLNTTGKDEPQAIKDEPDMTEIEQSELSEMTEN
EESIPALLEADILETLMENISRAKTSIIAYRIISQYYLLSAEYAAALPYIKSGISLTAFA
IRDLGAHLINSKFAFTLDLASAYTYFDAPKHHKTALSLFDKVLSEDEFNARAKLGKGLIF
MERENWIEAKTFLSEVAEKFSDNLDILSQLGWSEANLGNHDRALEIFNNVLNSIEGVDIK
TCELKAANYWRQAKTYLLLQKEEELKITDSDMRYVTLAYRSLIHSLKVLDTFSKSYSTLG
DIYANYYSDTKRAFGCYYKAFELDSSDIVAAKYMVETYCNSGNWSAAESISKILVKTDGA
KKYLRYTCWPFRVIGIANLERQQESDAIEWFQSALRIEPNNVESWVGLGQSYLSCGRIEA
SIRVFEKATELDPDHLYAKYFTAQSLSEMGEYVKSISIFEEIIMETPKEESFQVSYSETL
MKHAQDLFNQGFLTKSVSIAIEAISVMSYIATDLNRFPSNLWLSLFSALKLFILVESKVD
KLPIETVVSIFENCKIKDVSEIDDIDGVTISSLLTTADDNVVITCQSLILAAKCAISTGN
IDQATGTLKSSLWHNLGMAELISYLTLKDNKHKESSIFCFKKAIKYQSNSFESWVGLGIA
TMDANWKVSQHCFIKAIALAPRESHIWFNLAVLALKQDDIEFTRQVKSRLQSIAPQDSSA
RLGMALV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgttaaagatcttttaaaggaggctaaaaatgagcttgctagaggagattat
gaagaagctatagaaatatctaaagaggtgttgaaaaaggaagaaaataattattttgct
tatgtgtttatgggtaaagcttactcctgcatagctaatagtgtcgaagaggctttgaat
agttatataagggctactgaattggtaccgtcaaatgttttgggttggaaaggtctattt
ttattgataaactcaaacgatgttttaccaactcatctcacttttaataaatacttcgat
ttatgtggtgattattccaatgtgttattatcacaggagctgccattggtcgatttgatt
catgaaatgagaacaattaggaaaaaatatcctgattgtgaagaatcattcctaagacat
atgtgccctggttcgcaaatgggcgaatctatctctagacattttatcactccacaagaa
tgtctctcaaaattgatacagataattaattctaaagagaaagaacaagtttcaaaaatt
gtcagcagagaaagattgaaactaagtgctaatgatccattataccaaacaaagattaat
tcattggcttgggaggtttatcaaagttcagatgtcgaagatctatacgtccaattgatt
aatatttctgatgatgatgaagagagatcgaaatttgaagaagagctattagatcataga
atcgtagttttgaagtcaatgccaattgatcttaagggatcatacttccagaaggtaaaa
tcgatggtggaagatatggtcctagttggtactaagtctgaaaaagcgtggaaactttat
tttgaatggcaagattgtactgatctgaattctttggatggacaaatagtaatgaaatat
tttactacgttcccaaaggaaccattgtcagttatactatatgcatgggtatgttcaaaa
tattcttcttacgacataaaacaattaaacacaacaggtaaggatgaacctcaagccatt
aaagatgaaccagatatgacagaaattgaacagtctgaactgtcagaaatgacagaaaat
gaagaatcaataccagcattattggaagctgatattttagaaacccttatggaaaatata
tcaagagcaaaaactagtatcattgcttatagaataatttcccaatattacttattgtct
gcggaatatgctgctgcactaccttatattaaatctggtatatcattaacagcatttgcg
attagagatttaggtgcacatttaattaattcaaaatttgcatttactttagatcttgct
tccgcatacacttatttcgatgctccaaaacatcacaaaacagcgttaagtttattcgat
aaggtcctatccgaagatgaatttaatgctagagctaaactaggtaaaggtctgattttc
atggaaagagaaaactggatagaagctaaaacgttcttatctgaagttgctgaaaaattt
tcagacaatttagatattttatcacagttaggttggagtgaagcaaacctcggaaatcat
gatagagctcttgaaattttcaataatgttctaaatagtatagaaggtgttgatattaag
acatgtgaattaaaagcggccaattattggagacaagccaaaacatatttactattgcaa
aaagaagaagagttaaagataactgatagtgacatgagatacgtaacattagcttataga
tcgctaatccattcattaaaggtactagataccttctcaaaatcttattctactttgggt
gatatttatgcaaattattacagtgatacaaaaagggcattcggctgttactataaggca
tttgaattagattccagtgatatcgttgcagcaaaatatatggtcgagacatattgtaac
agtggaaattggtcggctgcagaatcaatctcaaaaatcttagttaaaaccgatggtgca
aagaaatatttaaggtatacatgttggccatttagagttataggtattgctaatttagag
agacaacaagagagcgatgcaattgaatggttccaatctgctttacgtattgaaccgaat
aatgtcgaatcgtgggttggattaggtcagtcttatttgagttgcggcagaatagaagcc
tctattagagtatttgaaaaggcaacagaattagatcccgatcacctgtatgcaaaatat
tttacagcacaatccctttcagagatgggtgaatatgttaagagtatttctatatttgaa
gaaataataatggaaaccccaaaggaagaatcattccaagtttcatactcagaaactttg
atgaaacatgcccaggatttatttaatcaaggatttttaacaaagtctgtatcaattgct
attgaggcaatttctgttatgagttatattgcgacagatttgaatcgtttcccaagcaat
ctatggctatctcttttctctgcattgaaattatttattctagtcgaatcaaaagtggat
aagttaccaatagaaaccgtagtttcgatttttgaaaattgtaaaataaaagacgtatca
gaaatcgatgatatcgatggtgttaccatctcatcattgctaactaccgctgatgataat
gttgtgataacatgccaatctctgattttagctgctaaatgtgcaatttcaactggtaat
attgatcaagctacaggaactttaaagtcatcactgtggcataatttaggtatggccgag
ctcatttcttatttaacattaaaagataataagcacaaggaatcatcgatcttctgcttt
aagaaagctattaaatatcaatcaaatagttttgaatcctgggtaggtttagggattgcc
actatggatgccaattggaaagtctctcagcattgttttataaaagcgattgctttagca
ccaagagagtctcatatttggtttaacttggctgttcttgcattgaaacaagacgatatt
gaatttacacgtcaagtcaaatcaaggttacagagtatagccccacaagattcctcagca
aggcttggtatggcattagta
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