Veillonella parvula: Vpar_0002
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Entry
Vpar_0002 CDS
T01130
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vpr
Veillonella parvula
Pathway
vpr03030
DNA replication
vpr03430
Mismatch repair
vpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vpar_0002
03430 Mismatch repair
Vpar_0002
03440 Homologous recombination
Vpar_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpr03032
]
Vpar_0002
03400 DNA repair and recombination proteins [BR:
vpr03400
]
Vpar_0002
Enzymes [BR:
vpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vpar_0002
DNA replication proteins [BR:
vpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vpar_0002
DNA repair and recombination proteins [BR:
vpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vpar_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
CS
Motif
Other DBs
NCBI-ProteinID:
ACZ23691
LinkDB
All DBs
Position
2229..3341
Genome browser
AA seq
370 aa
AA seq
DB search
MHITFPKANLQKAINVLQKVSQNKTSSNLPGAIYITTKNGQVELQGNDFELGIRLTIDGD
IKEPGTLVVGSRYFQELIRKLPGDTIELYKPEDGNSLTITSGSSEFNLVTLHPDDFSLVE
QIHDQDHVNIDSFAMKELIDLTNYAAATDEDRPVFTGALLEINENEVTMVATDTHRMAVK
KITIDEPATTPMRAIIPTKTLAEVSRLLPTDNPAMINIIWNRTQIVFNFESIYIISRLIE
GTYPEYEKVIPSQFDSSAVIDRREFAGAVDRVSLLAKDISYNVIRYDWSESNVTLSTQNT
EIGMAKEDVAVEFKGTPFTISFNGRYISDILRHSTGDNIHLFLKQNGPVVIRQDNNPNYT
YVVTPVRTNA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcatattacattcccaaaagcaaatcttcaaaaagcaatcaacgtattgcaaaaggta
tctcaaaataaaacaagttccaacttaccaggtgctatttacataactacaaaaaatggt
caagtagaattgcaaggtaacgactttgaacttggtatccgtttaacaattgacggagat
atcaaagaacctggtactttagtagtaggttcccgttatttccaagaattaattcgtaaa
ttacctggcgatactatcgaactttacaaaccagaagacggaaattctttgacaatcaca
tctggatcttccgaatttaatcttgttacattacacccagatgatttctcattggttgaa
caaattcacgaccaagatcatgtaaacatcgatagctttgctatgaaagaactcatcgat
ttaacaaactacgcagcagctactgatgaagatcgtcctgtttttaccggtgctcttctt
gaaatcaatgaaaacgaagtcactatggttgctaccgatacacaccgtatggctgttaaa
aaaatcactatcgatgagccagcaactactccaatgcgcgctatcattcctacaaaaacg
ttagctgaagtatctcgtttattaccaacagataatccagccatgatcaatatcatttgg
aatcgcacacaaatcgtatttaattttgaatctatttatattatttctcgcttaatcgaa
ggcacgtatcctgaatatgaaaaggtaattccttcccaattcgattctagcgctgtaatc
gaccgccgcgaattcgctggtgctgttgatcgcgtatccttattggctaaagacatcagc
tataacgtaattcgttatgattggtctgaaagcaatgtcacattgtctactcaaaatact
gaaatcggtatggctaaagaagacgtagctgttgaatttaaaggtacaccttttacaatc
tccttcaatggtcgttacatctctgatattttgcgtcacagcacaggcgacaatatccac
ttgttcttaaaacaaaatggtcctgttgtcattcgccaagacaataatccgaactataca
tacgtagtaacaccagttcgcacgaatgcataa
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