Veillonella parvula: Vpar_0630
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Entry
Vpar_0630 CDS
T01130
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
vpr
Veillonella parvula
Pathway
vpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vpar_0630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpr03019
]
Vpar_0630
03009 Ribosome biogenesis [BR:
vpr03009
]
Vpar_0630
Enzymes [BR:
vpr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
Vpar_0630
Messenger RNA biogenesis [BR:
vpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Vpar_0630
Ribosome biogenesis [BR:
vpr03009
]
Prokaryotic type
rRNA helicases
Vpar_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACZ24313
UniProt:
D1BLQ6
LinkDB
All DBs
Position
complement(764336..765634)
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AA seq
432 aa
AA seq
DB search
MKSFKSLGVCDELIIALQKQGIKEPTPIQEQSIPVVFKGNDVIAKAQTGTGKTLAFLLPI
LQRVHTDVHQEQVLIIAPTRELIKQISDEAKELGSILNVDILPLIGGKTIEAQLQQLGRR
PQVILGTPGRLLDHAKRGSLHLDCIRRVVLDEADQMLHMGFLPDIENLISQTDANRQLLL
FSATIPDKIRNLAKAYMSKPISVTAEGKHITLESIDQRVYMMNPEEKTQRLIKMIEDDNP
FLAIVFCNKREGAIRLSYELTAAGLNIAEMHGDLTQGRRTQILRDFAKAKTQILVATDIA
ARGIDIEGITHVYNYDVPRDVDYYIHRIGRTGRAGNSGIAVTFATPQDEAWLRRIERAIQ
ATLTKYTKDGQIKTKGNASTAPKRTKLVSKPKVTSTYQSTKAKAHKARGHKGSNTRQRRA
STSQTGRRGKRR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttttaaatctttaggtgtttgtgatgagctcatcatagccctacaaaaacaa
ggtatcaaggagcccacgccaattcaagaacaatccattcctgtcgtctttaaagggaat
gatgtcatagcaaaagctcaaacaggcacggggaagacactagccttcttactgccaatt
ttacaacgtgtacatactgatgttcatcaagaacaagtgcttatcattgcacctacacgg
gaactaattaaacaaatttccgacgaagcgaaggaactaggttctattttaaatgtagat
atcctccctctcatcggtggtaaaactattgaagcccaactacagcaactgggacgtcgt
cctcaagttattctaggtacacctggtcgattattagatcacgcaaaacgcggttcccta
catttagattgtattcgccgtgttgtactagacgaagcagaccaaatgttgcatatgggt
ttcttaccagatattgaaaatctcattagccaaacagacgctaataggcaactgttgcta
ttctctgcaacaattccagataaaatccgaaatctcgcaaaggcatacatgtctaaacct
atttctgtaacagcagaaggcaaacatatcacgctcgaatcaattgatcaacgagtgtat
atgatgaatcctgaagaaaaaacacaacgtctcatcaaaatgattgaagatgacaatcca
ttcttagcaattgtattctgtaataaacgggaaggtgccattcgtttatcctacgagtta
accgcagcagggcttaatattgcagaaatgcacggtgacttgacacaaggtcgtcgcaca
caaattctacgagactttgcaaaagctaaaacacaaatcttagtggctaccgatattgcg
gctcgcggtatcgacattgaaggtatcacacatgtatataattacgacgtacctcgcgat
gtagattactatatccatcgaattggacgtacaggtcgtgctggtaactcaggtattgct
gtaacatttgcaactccacaggatgaggcttggttaagacgtattgaacgagctattcaa
gctacgcttaccaaatatacaaaagatggtcagattaagactaagggcaacgccagtact
gctccgaagcgcacaaaattagttagtaaacctaaggttacaagcacttaccaatcaact
aaggctaaagctcacaaggcacgaggtcacaaaggctcaaatacacgccaacgccgcgct
tctacgtctcagactgggcgtcgtggcaaacgcagataa
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