Vibrio qinghaiensis: CCZ37_08495
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Entry
CCZ37_08495 CDS
T05259
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCZ37_08495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_08495
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCZ37_08495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCZ37_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_22
UB2H
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ASU22632
UniProt:
A0A223MYJ2
LinkDB
All DBs
Position
1:complement(1858916..1860946)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKTFELVSSYQPSGDQPTAIKQLFDGLDAGLAHQTLLGVTGSGKTFTLANVIAKAQRPV
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSINSHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPDSYLKMMLHVRRGDVMDQRDIIRRLAELQ
YTRNDMAFERGQFRVRGEVIDIFPAESDYAAVRVEMFDDEVDCISLFDPLTGAMIQRDLP
RYTIYPKTHYVTPRERIVDAIEHIKEELRTRQAYLLENNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRKEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFESLAPQTIFVSATPGNYELEKSAGQIVDQVVRPTGLL
DPVLEVRPVATQVDDVLSEIRIRSAKDERVLITTLTKRMAEDLTEYLHEHGVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNIEGKAILYADRITNSMKKAMDETDRRREKQQAHNEEQGITPQALKRNVKDIMEL
GDITKSKQQRANKQVPLSKVAESSQIYEVFTPLQLEKEIAKLEGLMYKHAQNLEFELAAE
KRDQIEKLRQQFITNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgtttgaattggtatcaagttatcaaccgtcaggcgatcaacctacggcg
atcaagcaattgtttgacgggttggatgcaggccttgcccatcaaaccttattaggtgta
acagggtcaggaaaaacattcaccttggctaatgtgatcgccaaggcgcagcgtccagtt
attttgttggcaccgaataaaacgctcgcagcccagctgtatggtgagatgaagtcattt
ttccccaacaatgcggttgagtatttcgtctcttattatgactactatcaaccagaagcc
tatgtgccgactaccgatacttttatagaaaaagactcctcaattaactcacacatcgaa
caaatgcgactctccgcgaccaaagcgctgcttgagcgtaaagatgcgattattgtggct
tctgtatcggcgatttacggtttgggtgatcctgattcttatctgaaaatgatgctgcac
gttcgccgtggtgatgtgatggatcagcgcgacattatccgccgtttagccgagctccaa
tacacacgtaacgatatggcgtttgaacgtggtcaatttagagttcgtggagaggtgatc
gatatctttcccgctgaatcggattatgcggccgtgcgtgttgaaatgtttgatgatgag
gtagattgcatcagtttgtttgacccactgacgggcgcaatgattcagcgagatcttcct
cgctatactatttatcctaaaacgcactacgttacgccaagagagcgcattgtcgatgcg
atagagcacattaaagaggagctgcgaactcgccaagcttatctgttggaaaacaataag
ctactcgaagagcagcgcatatcgcagcgtactcaatttgatattgaaatgatgaatgag
cttggtttttgttcaggtattgaaaactattcacgttatctcagtgggcgaaaagagggg
gagccgcctccgaccctgtttgactatctaccgcatgacggtttactgattatcgatgaa
tcacacgtaaccgtgccgcaaattggcgcgatgttcaaaggcgatcgttcacgcaaagaa
acgttagtggagtttggtttccggttgccttccgctttagataaccgcccactaaagttt
gaagagttcgaatcacttgcgccgcagacgatctttgtttctgctaccccgggcaactat
gagctagaaaaatcagccggacaaattgtcgatcaagtggtgcgcccaactgggttactt
gaccccgtgctggaggtgcgaccagtcgcaacacaagtggatgatgtgttgtcagagatc
cgcattcgctcagcgaaagatgaacgtgtgctgatcacgacattgactaaacgcatggct
gaagacttaactgagtatcttcatgaacatggggttaaggtcagatatctgcactcagat
attgatactgttgagcgggttgagattattcgcgaccttcgcctaggcgagtttgatgtg
ttagtgggtattaacttactgcgtgaaggtttggatatgcctgaagtctctctcgtcgca
attcttgatgcggataaagaaggctttctacgttcagaacgttcattaattcagaccatt
ggccgtgcggcacgtaacattgaaggcaaagcgattctctatgctgaccgtattaccaac
tcaatgaagaaagcgatggatgagactgatcgccgtcgtgaaaagcagcaagcacacaat
gaagaacaagggataacacctcaggcgctgaaacgtaatgtcaaagatattatggagtta
ggtgatattaccaagtccaagcagcagcgagcgaacaaacaagtgcctttgtcgaaggtg
gcagaaagctcgcaaatctatgaagtattcacgccgctacaactggaaaaagagatcgct
aagctagaagggctaatgtacaaacacgcacaaaacctagaatttgaattggctgccgaa
aagcgtgaccaaattgaaaaactgcgtcagcagttcattaccaacagttaa
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