Vigna radiata (mung bean): 106774010
Help
Entry
106774010 CDS
T04126
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106774010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106774010
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106774010
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106774010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
106774010
NCBI-ProteinID:
XP_014516284
UniProt:
A0A1S3VDS8
LinkDB
All DBs
Position
9:complement(7581853..7603073)
Genome browser
AA seq
2404 aa
AA seq
DB search
MMTLPHSLPSMSNFSSNQIRFLLTTLNEVNFDSVFHQLCQFTEFGTTGCILLLQTCLDHY
GYARRDTKDMQHEPILGAVIKYLLGKPNFSTVFSESMKNMEINESFLENFCNGLQLSLLE
KIIISLALSDSENSDFRLCGKTFCMAQIEELCANPGSLSFHEQIHGVIMFLKQSEGLSKH
VDSFMQILSLVEFKATPPFVLTPLLPDEMHEADFLRNMELFHDSEENDFDAILADIQKEM
NMGDIVKELGYGCTVDVSQCKEIFSLFLPLTEHTISKLLGAIACTHTGLEDNQNTYLNFR
AAHGYNVSELPPLNSWNIDVLIDTVKHLAPHTNWVSVIENLDHEGFFLPSEEAFSFLMSV
YKLACKEPFPLHAVCGSVWKNTEGQLSFLKYAVSAPPEMFTFAHSGRQLAYVDAINGHKL
QNGHPNHSWLCLDLLDALCQLAEKGHASVVRSILDYPLKHCPEVLLLGIAHINTAYNLLQ
QEVSPIVFPMIVKSAVGSGMILHLWHVNPNLVFRGIIDSQNNDADSIIRIVDICQELKIL
SSVVEIIPSHYSIRLAAVASRKELLDLEKWLSSNLITYKETFFEECLKFIKDAHFGGSQN
LSGKSFHPSSGVLSLYAETTATVLKVLKSHNDLIATRQLSEELERLHISIIDSNPRLQNG
GAGDSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIA
NLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLF
GSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDGDGQSHAS
VITNHHSAQATLGHVEQLGGSTVIQPGQQHLSLQLQQRRENPLDDRHKASVGSSTDVKPL
LSSLGQSSVLPTDASNTNKLHSSVSTSSMLSSSSPGFVRPSRGPTSTRFGSALNIETLVA
AAEKREIPIEAPGSEVQDKILFIINNVSATNIEAKAKEFTEILKEQYYPWFAQYMVMKRA
SIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWL
GKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMG
ILGLLVEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREFEGNPDFSNKDV
GASQSQMITDIKSGLVPPVNQVELPLEVTNPSNTGAHPHMLSQYAGPLHMSSGALMEDEK
VTPLGLSDQLPSAQGLLQATPAPTPFSLGQMQPQIPNIGTHVIINQKLSGFGLQMHFQRA
VPIAMDRAIKEIVTSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSL
AHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAIS
TIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDF
VRLPWQNQSSQSSHSMSAGVAAQSGNTGLPSTNGSVSGQVNPGYPVSTGYEGVSRPLEDI
TESNLAPHFSASSIHIRASDSVSQHSLEKESVASFPSAASTPELHAVDSSDVKESGTSQP
LVTSGAMERLGSSFLEPSLTTRDALDKYQIVAQKLEAMVSTDSRDVEIQGVISEVPEIIL
RCVSRDEAALAVAQKVFKGLYDNASNNVHVSAHLAILTAIRDVCKLAVKELTSWVIYSEE
ERKYNKEITIGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISE
LHNLVDALAKLATKPGCPEPLPQLLEMIKNPGALSSSNAGKEDKARQSRDIKVPGLLPAN
REEFNSVDSIEPDPAGFREQVSILFKEWYRICELPGANDTASAHFILQLHQNGLLKGDDL
TDRFFRLLLELAVAHCLSTEMINSGSLQSQQLQTMSFLAIDIYAKLVFSILKGSNKPFLL
SKILAVAVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAF
HALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAEL
GDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPD
PSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQSSPFLSELKDKMLL
APNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQSSANAFPLAVFSVGAALDIF
QTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLER
LIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDNMV
SGWV
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcttcctcattccttgccatccatgtctaacttttcctccaaccagattcgc
tttcttctcaccaccttgaacgaagtcaactttgactccgttttccatcaactctgtcag
tttactgaatttggaaccactggatgcattttgctgcttcaaacttgcttggatcactat
ggttatgccagaagagatacaaaagacatgcagcacgagccaattcttggtgcagtcatt
aaatacctcttgggcaaaccaaacttcagtacagtattttctgagtcgatgaagaatatg
gaaatcaatgaaagctttttggagaacttttgtaatggattgcagttatctttattggaa
aagattatcatcagtcttgcgttatctgattctgagaattctgattttaggctgtgtggc
aaaaccttttgcatggctcagatcgaggaattatgcgccaatcctggttctttgagtttc
catgagcaaattcacggtgttatcatgttcctaaagcagtccgagggtctttccaagcat
gtggattccttcatgcagatattatcacttgtggagttcaaagccacaccaccttttgtc
ctgactccattgcttcctgatgagatgcatgaggctgattttttaaggaatatggagttg
ttccacgactctgaagaaaatgactttgatgctatcttggcagacatacagaaggaaatg
aacatgggtgatattgtgaaggagctaggctatggatgcactgttgatgtctcacagtgc
aaggaaatattttctctcttcttacctttaactgaacatacaatctctaaattacttggt
gctattgcttgtacccatactgggctggaggacaaccaaaacacatacttaaattttcgt
gcagcccatggatacaatgtttctgagttgccgccactaaactcttggaatattgatgtc
ttgattgatacagtcaagcatcttgcacctcataccaattgggtaagtgttattgaaaat
cttgatcatgaagggtttttccttcctagtgaggaggcattctcttttctcatgtctgta
tataaacttgcctgtaaggaaccgtttcctctccatgctgtctgtggatctgtctggaag
aatactgagggtcagttgtctttccttaaatatgctgtatcagcaccaccggaaatgttt
acctttgcacactctggaagacagctggcatatgttgatgcaattaatggccacaagctt
caaaatggacatccaaatcactcatggctgtgtcttgaccttttagatgcactgtgccaa
ctagccgagaagggtcatgccagtgttgttcgttcaatccttgattatccccttaaacac
tgtcctgaagtcctacttcttgggatcgcacacattaatactgcctacaacctcttgcag
caggaagtatctccaattgtctttcccatgattgttaaaagtgctgtaggcagtgggatg
attctacacctttggcatgttaatcctaatttggtctttagagggattattgattctcaa
aacaacgatgcagacagtattataagaattgtggacatctgccaggagctaaagatttta
tcatctgtggtggaaattattccttctcattatagtataaggttagcagctgttgcatca
agaaaagaattacttgaccttgagaagtggttgagtagcaacttaattacatacaaggaa
accttttttgaggagtgtctcaagttcattaaggatgcccattttggtggatcgcagaac
ctttctggcaaatcttttcatccatctagtggtgttctgagtctatatgctgagacaact
gctactgttttgaaggttcttaaatctcataatgacttgattgccactagacaactttct
gaggagttggagaggctgcatatatctattatagattcaaatccaaggcttcagaatggc
ggggcaggcgattcatctacttctgatggttatgcagatgacattgaagcagaagcaaac
tcttatttccatcaaatgttctctgatcagttgaccattaatgctatggtacaaatgctt
gctagattcaaggaatcttcagtgaagagggagaaatcgatttttgaatgcatgattgca
aacttattcgaggagtatagattttttccaaagtatcctgaaaggcaactcaaaatagct
gcagttctctttggttctgtgatcaagcatcagcttgtaactcatctatccttggggatt
gcacttcgttatgttcttgatgcattgcgcaagcctgcagattcaaaaatgtttttgttt
ggaagtctggcattggagcagtttgtggatcgtctaattgagtggcctcagtactgcaat
catattcttcaaatttcccatttgcgtagtacgcattcagaaatagttgctttcattgag
caggccctcgccaggatttcctctggtcattcagatggtgatgggcagagtcatgcttcc
gttattacgaaccatcattctgcgcaggctacattagggcacgtagagcagctcggtggc
tccaccgtcatacaacctgggcagcaacatttgtcactacagcttcaacagagacgtgaa
aatcccttggatgatcgtcataaagcttctgtgggttcatctactgatgtaaaaccactg
ttatcttctctggggcaatcttcagtactacctactgatgcttctaataccaataagtta
catagctccgtcagcacctcgtcaatgctatcttcttcttctcctggttttgttcgccct
tcccgtggacctacttctaccaggtttggatctgccttgaacattgaaacattggttgct
gctgctgagaaaagagaaattcctatagaggctccagggtcagaggttcaggacaagata
ttatttattattaataatgtttctgctactaatattgaagctaaagcaaaggagttcact
gaaattttgaaagaacagtactatccttggtttgcgcagtatatggttatgaaaagagca
agcattgagccaaatttccatgacctttacctgaaatttctggataaagttaattcaaag
gctttgaacaaagagattgttcaggcaacttatgaaaattgcaaggttcttttgggatct
gagctcattaaatcaagttcagaggaacgctctttgcttaaaaatttgggtagctggctt
ggaaagttaacaattggccggaatcaggttttgagggctcgagaaatagacccaaagtct
ttgattatggaggcatatgagaaggggctaatgattgctgttattccatttacgtcaaag
gtccttgaaccgtgccaaagcagtcttgcataccaacctcccaatccttggactatgggc
attttgggattgcttgttgagatttattcaatgccaaacttgaaaatgaacctaaagttt
gacatagaggttttattcaaaaatcttggtgttgatatgaaggatgtcaccccaacatcc
ctcctgaaggatcgaaaaagagaatttgaaggaaatcctgatttctctaataaagatgtg
ggggcatctcaatcacaaatgatcactgatataaaatctggtcttgtacctccagtaaac
caagtggaattgccacttgaagtcaccaatccatcaaatacgggtgctcatccacatatg
ctgtctcagtatgctggccctcttcatatgtcctcgggtgcattgatggaagatgaaaag
gtaacacctttgggattgtccgatcaacttccctctgctcaaggactgttacaagcaact
cctgccccaacaccgttttctcttggccagatgcaaccacagatacctaatattgggact
catgttattattaatcaaaagctcagtggttttggtttgcaaatgcattttcagagagcg
gtacccattgcaatggatagagctatcaaagagatagtgactagtattgtgcagcgtagt
gtttccatagcaacacaaactacaaaggagcttgttttaaaggattatgccatggaatct
gatgagacacgcatattaaatgcagcgcacttaatggtcgctagtcttgctgggagtttg
gctcatgttacttgcaaggagccattacgggcatcaatctccggtcaactgaggacttca
cttcagaacctaaatattgccaatgaaattttggaacaggctgtgcaacttgtaaccaac
gataatcttgatctaggttgtgctgtcattgagcaggctgctactgataaggctataagc
actatcgacacagagattggtcaacaactctctttgagaaggaagcatcgagagggtatg
ggttctacattttttgatgcaaatttgtatccacaaggttcaatgggtggtgttccagag
cctcttcgccccaagcctggccagttgtcactgtcacaacagcgtgtctatgaggacttt
gttcggcttccttggcaaaaccagtctagccagagctcacattctatgtctgctggtgtt
gctgctcaatctggcaatactggtcttcctagcaccaatggttctgtatctggtcaggtt
aaccctggttaccccgtgagcacaggatatgaaggagtatctcgaccattagaagatata
acagagtctaatttggctccacattttagtgcttcctcaattcacattagagcatctgat
agtgtttcacagcatagtttggagaaagagtctgttgcttcatttccttcagcagcttcc
acccctgaattgcatgcagtggattcgtctgatgtgaaagaatccggaacttcgcagcca
ctagttacatcaggtgctatggagcgccttggaagtagtttcttagagccttctcttact
acaagagatgccctagataaataccaaattgtcgcacaaaagttggaagctatggtcagc
actgattctagggatgtagaaatccagggtgtcatctctgaggttcctgagatcatactt
agatgtgttagtcgagatgaggcagctttagctgtggctcaaaaggtattcaagggttta
tatgataatgcatcaaacaacgtccacgtctctgcgcatcttgcaatcctgactgccatt
cgggatgtttgcaaacttgctgtgaaggagcttactagttgggtaatttactcagaagaa
gaaaggaaatataacaaagaaattactattgggctcattcgtagtgaattgctaaatctt
accgagtacaatgttcatatggcaaaacttattgatggaggaaggaacaaggctgcaacg
gaattttccatttcccttcttcaaaccctggttatcgaggaacctaaagttatttcagaa
cttcacaatcttgttgatgctttggctaagcttgctacaaagcctggatgccctgagcca
ttaccacagcttcttgaaatgatcaagaatcctggtgctttatcatctagcaatgctgga
aaggaggataaggcaagacagtcaagagacattaaggttcctggtctgctacctgcaaac
agggaagagttcaacagcgtggattctattgaaccagatcctgctgggttccgggagcag
gtttccattttgttcaaagaatggtatagaatttgtgagcttcctggtgccaatgataca
gcttctgcccacttcatcttgcaattgcatcagaatgggctgctgaagggtgatgatctt
acagaccgctttttccggctattactggagcttgctgttgcgcattgcctatccactgag
atgattaattcagggtcactacaatcccaacagctgcagacaatgtcatttcttgcaatt
gatatttacgcaaagcttgtcttctcaatcttgaagggatcaaacaaaccctttctttta
tccaagattctagcagttgctgtcagattcattataaaagatgcagaggagaagaaggca
tcttttaatccaagaccacttttcagattattcatcaactggcttctagatcttggttca
ctcgaacctgttactgacggtgcaaatctccagattttgactgcttttgccaatgcattt
catgcattgcagcccctcaaagttcctgcgttcagttttgcatggcttgagctgataagt
cacaggagcttcatgcctaaaatgttgactggtaatggtcaaaaaggttggccttatatc
caaaggttgctagtagacctgttccaatttatggagccttttctgaggcatgctgaactt
ggagacccggtccgtgtcctctacaaagggacattaagggtgctcttagtgctacttcat
gacttccccgagtttctatgtgactatcactttaccttttgtgatgttattcctccaagc
tgcattcagatgaggaatatcattctaagtgcatttccacggagtatgaggctgcccgat
ccatctactcctaatttgaagattgatttacttcaggaaattacccaatcaccccgcatt
ctttcagaggttgatgctgcacttaaagcaaagcagatgaaggctgatgtagatgaatac
cttaagacaaggcaacagagttctccatttttgtctgaactgaaggacaagatgcttctc
gcacccaatgaagctgcctctgctgggactcgatacaatgtgccgttaatcaactcactt
gtgctatatgttggaatgcaggcaatccatcagcttcagggacggactccccatacacaa
tcttcagcaaatgctttccccttagccgtattttctgttggtgctgcattggatattttc
cagacactcattgtggacttggacacggaaggccgctaccttttcctaaacgccattgcc
aaccaactgcgttaccctaataccaacacacactacttttcctttatccttctttacttg
tttgctgaatcaaaccaggaagttatccaagaacaaattaccagagtcttgttggaacgc
ctaattgttaaccgtcctcatccctggggcctcctcattacatttattgaactcatcaag
aatcctaggtataacttctggaaccggagtttcatcagatgtgccccggagatcgaaaaa
ctttttgaatctgtgtcaaggtcttgtggtggtccaaaaccagtggatgataacatggta
tccggttgggtctga
DBGET
integrated database retrieval system
